Trachemys scripta elegans (red-eared slider): 117887487
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Entry
117887487 CDS
T07347
Symbol
CASKIN2
Name
(RefSeq) caskin-2 isoform X1
KO
K21952
CASK-interacting protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117887487 (CASKIN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117887487 (CASKIN2)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
117887487 (CASKIN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Caskin-Pro-rich
SAM_1
Ank_4
SAM_2
Ank_5
Caskin-tail
Ank_3
Ank_KRIT1
Caskin1-CID
SH3_2
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
117887487
NCBI-ProteinID:
XP_034646019
LinkDB
All DBs
Position
14:20448214..20523167
Genome browser
AA seq
1474 aa
AA seq
DB search
MMGREQELIQAVKNGDVPGVQKLVAKVKASKSKLLGSAKRLNVNYQDADGFSALHHAALG
GSLELISLLLEAQATVDIKDSNGMRPLHYAAWQGRVEPVHLLLRAAALVNMASLDGQIPL
HLSAQYGHYEVSEMLLQHQSNPCLINKAKKTPLDLACEFGRLKVAQLLLNSHMCVALLEG
QSKDTSDPNYTTPLHLAAKNGHKEIIRQLLKAGIEINRQTKTGTALHEAALYGKTEVVRL
LLEGGVDVNIRNTYNQTALDIVNQFTTSHASKDIKQLLREASGILKVRALKDFWNLHDPT
ALNIRAGDIITVLEQHSDGRWKGHIHDTQKGTDRVGYFPPSIVEVISKRTGMTLPRMVPA
HQRQGIAAPPGGLQPLPAGDRNSVGSEGSIGSIRSAGSGQSTEGTNGQSTSILIENATPL
PPGGEDLQQHLLGSNSQNGQLNSLTGTLGRQNVANCNTSNRIFSHQYLRPEQLLEGKDAE
AIYNWLSEFQLEFYAANFLNAGYDVPTISRMTPEDLTAIGVTKPGHRKKISTEIGQLSIA
EWLPNYIPADLMEWLSAIGLPQYHKKLVSNGYDSISIVTDLTWEDLQEIGINKLGHQKKI
MLAVKKLTDIRKNLNQAETNPASRKIPGALDIVTIESVENGESQSPHTPKMITFQDSELS
YELQTAMSNSCQETLPMKNTQGMSRSQESIGVRSRGSGHSQDNVLSRTSHSQESLGSGSG
SSGHSSTQPRQKDNAGILPGRPNQDNYGKVIIQLTAQEGLNGYSNGSGGSPLKERNLPEG
TDQYQRPVAQKGSVPLLQTSNSLPAATPCTPPQTPNKGTAPYVFMYPHISLKSPSVPEQP
KNPAHLYPQFSSSQRSNLQSSAQKAFSYLHSHCSGTESPCVSPKPGATLGSWQAGEQQNG
DTFKYKKRSHSLNRYALSDGEHEKEEVPTSTLGSYATLTRRPGRSQVPRTYLQSDTKVVR
SQSFAIRAKRKGPPPPPPKRLSSVSSAQAVEAEGEQDLESERKPTVAQESVDVTPSPWLG
TSDASSSQTVKSKAAMLEVPTVGGSPPKPLLLQKPPTPDHELVSSTGSDGRPCGARVSEG
SCSTRLSDNERDAFESNRPRRRTFSESSVTTTEALQSSLEDVQSDTEEELRPGPEDCEIS
SSSSQNSSSECIPFAEEGNLTIKQRPKPPGHHKAEATSLVSESSSPTAASVGPPCSSAGK
ELGGTTAKELEVLEFNLTESDTVKRRPRHKEREPLQTLLKAFSLAGQSQTLASPPPQYAQ
AQAVSITGPVPEPRGNGDVFDDDSVEFRIAEIEKSILSLEKGIKKPPLPLKSASPGELHG
GAVLLRTSTVGPDASAKHTSVASTKLVFSGPKTIYQQVLQPSRNTIAPWATAEVAGSTAV
ACPSKLEIGNKAALSSGMPIFMKPLSVAPDAALAQQRLEQTNSSLTAALQAAEKKITAEE
LDSHYGVTHSANNILEDISNMFDDLADQLDAMLD
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgatgggacgagagcaggagctgatccaggctgtgaaaaatggggatgtacctggtgtg
cagaaactggtggccaaggtcaaagcatccaagagcaagctcctgggatcagccaagcga
ctgaatgtgaattaccaggacgcggacgggttctcagcactgcaccatgcggccctgggt
gggagcctggagctcatctccctgctgctggaggcacaggccactgttgacataaaggac
agcaatgggatgcgcccgctgcactacgctgcctggcaggggagggtggagccggtccac
ctgctgctgcgggcagccgccttggtcaacatggcgtcactggacgggcagatcccgctg
cacctgtctgcgcagtacgggcactacgaggtgtcagaaatgctgctccagcaccagtcc
aacccgtgtctcatcaataaggcaaagaaaacccccctggacctggcctgtgagtttggc
cggcttaaggttgcccaattgctgctgaacagccacatgtgtgttgcgctcctggagggt
cagtccaaagacacgagtgaccccaactacaccacccctctgcacctggcagccaagaac
gggcacaaggagataatcaggcagctgctgaaagctgggattgagatcaacaggcagacg
aagacgggcacagccctgcatgaggcagcgctctacggcaagacggaggtggtgcgcctg
ctgctggagggtggcgtagacgtgaacatccgaaacacctacaaccagacggccctggac
atcgtgaaccagttcaccacctcgcatgccagcaaggatatcaagcaactcctgagagag
gcatcaggaatcctgaaagtccgagctttaaaggatttctggaacctccacgacccgact
gctctcaacatccgggcaggagatatcatcacggtcctggagcagcactccgacgggcgc
tggaaggggcacatccacgacactcagaaaggcaccgatcgggtcggctacttccctccc
tccatcgtcgaggtcatcagcaagcggacaggcatgactcttccccgcatggtgcctgca
caccagcgccagggcattgccgcccctcccggcgggctgcagccactcccagcaggagac
aggaacagcgtgggcagcgagggcagcattggcagtattcgcagtgccggcagcgggcag
agcactgagggcaccaacgggcagagcaccagtatcctcattgagaacgccacgccgctt
ccccctggtggtgaggacctacaacagcacctcttaggatcaaatagccagaatgggcag
ctgaactccttgacaggaaccctcgggcgccagaacgtggccaactgtaacaccagcaac
aggatcttctctcaccaatacctccgccctgaacagctcctggagggaaaggatgcagaa
gccatttacaactggctgagtgagttccagctggagttctacgcggccaacttcctcaat
gctggctatgacgtccccaccatcagccgcatgaccccagaggacctaacagccattggg
gtgactaagccggggcacagaaagaaaatctccactgagattggacagctcagcattgca
gagtggctgcccaattacattcctgccgacctgatggagtggctgagtgccattgggctg
ccccagtaccataagaagctggtgagcaatggctatgactccatcagcattgtaacagac
ctgacgtgggaggacctgcaggagattggcatcaacaaactgggtcaccagaagaagatc
atgctggctgtcaagaagctgacagacatccgcaagaacttgaaccaagcagaaaccaat
ccagcaagtcgcaaaatccctggggccctggacatagtcaccattgagtctgttgagaat
ggagagtcccagtctccgcacacgcccaagatgataaccttccaggacagcgagctgagc
tatgagctccaaacagccatgtccaacagctgccaggaaacgctccccatgaagaacact
caggggatgtcacggagtcaggagagcattggagtgcgctccagagggtcaggacattct
caggacaacgtgttgtccaggaccagccattcccaggagagcctgggcagcggcagtggc
agcagcgggcactcttccacacagccccgacagaaggataacgctggcattctgccaggg
agacctaaccaagataattacgggaaggttattatccagctgactgcccaagagggactg
aatggctactccaatgggtctgggggaagccctctgaaagagaggaacctccccgaaggg
accgatcagtaccagaggcctgtggctcagaaaggcagtgttccactgttacagacatcc
aactctctaccagcagcaaccccctgcaccccaccccagacgcccaataagggcacagca
ccctacgtcttcatgtatcctcacatctccttgaaatcccccagtgttcctgagcagccg
aagaacccagcacacctgtacccccagttctcctcttcccagaggagcaatctccagtca
tcagctcagaaagctttctcctatctccattcccactgcagtggcacggaatcaccatgt
gtgtctccaaagcctggtgccaccctgggctcctggcaggctggagaacagcaaaatgga
gacaccttcaagtacaagaagcgctctcacagcctgaaccgctacgctctgtcggatggc
gagcatgagaaggaggaggtacccactagcaccttgggctcctacgccaccctcaccagg
cgcccgggacggagccaagtgccacgcacctatctgcagtcagacaccaaggtcgttcgc
agccagtcctttgccatccgggcaaagaggaaagggcctccaccccctccacccaagcgc
ctgagctctgtctccagtgcccaggctgtggaggcagagggggagcaggatctggaatcg
gagagaaaaccgactgttgcccaagagtcggtggatgtgactccctcaccatggctgggc
accagcgatgcaagcagcagccaaacagtgaagagcaaagctgcaatgcttgaggtgccc
accgtaggtgggagtccaccaaagcctcttctgttacaaaagcccccaactccagatcac
gagctagtttctagtacaggctcagatggtcggccctgtggagccagggtctctgaaggc
tcctgcagcacgaggctctctgataatgagagagatgcctttgagagcaacaggccccgc
cgacgcacgtttagcgaatccagcgtcaccacgacggaggccttgcaaagcagcctggag
gacgtccagtctgacacagaggaggagctgagacctggcccagaggactgtgagatctcg
tcatcgtcctctcagaacagctccagtgagtgcattccatttgcagaagaaggcaactta
accatcaaacagcgaccaaagcctcccgggcaccacaaggcagaagccaccagcctggtc
tctgagtccagctccccgacagctgccagtgtggggcctccctgctcttctgctgggaag
gagctgggaggaaccacagcgaaagagttggaggtgctggaattcaacctcaccgagtct
gacacggtgaagaggaggcccaggcacaaggagagggagccactacagactctgctaaaa
gcgttcagcttggctggccagagccagactctcgcgagtccgcccccacaatatgcacag
gcccaagccgtgagcatcacgggcccagtgccggagccccgggggaacggagacgttttt
gatgacgacagtgtggaattcagaattgctgagattgagaagagcatcctgtctctggag
aaggggatcaaaaagcctccacttcctctgaagtcagccagccctggggagctgcatgga
ggtgctgtcctcctgaggacctccactgtagggccagatgcctcagccaagcacacgtcc
gttgcttctacaaaactggtcttttcagggccaaaaacgatttatcagcaagtcctgcag
ccctcccggaataccattgccccctgggcaactgctgaggtggcaggatccacggctgtt
gcctgcccatcgaagctcgagattggcaacaaggcagccttgagcagcgggatgcccatt
tttatgaagcctttgagtgtcgctccggatgcagccctggctcagcagagactggaacaa
accaactcctccctgacagctgcgctgcaggctgcggagaaaaaaataacagccgaggag
ttggacagtcactacggggttacgcactcggctaataacatcctggaagacatcagcaac
atgttcgatgacctggctgaccagctggacgccatgctggactga
DBGET
integrated database retrieval system
