Trachemys scripta elegans (red-eared slider): 117887606
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Entry
117887606 CDS
T07347
Symbol
CACNA1I
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
tst04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117887606 (CACNA1I)
04020 Calcium signaling pathway
117887606 (CACNA1I)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117887606 (CACNA1I)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117887606 (CACNA1I)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
117887606
NCBI-ProteinID:
XP_034646504
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All DBs
Position
1:complement(90393708..90510249)
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AA seq
1769 aa
AA seq
DB search
MMVILLNCVTLGMYQPCDDMDCLNDRCKILQVFDDFIFIFFAMEMVLKMVALGIFGKKCY
LGDTWNRLDFFIVMAGMVEYSLDLQNINLSAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCFMEENFTIQGDIILPPYYQPEEDDEM
PFICSLSGDNGIMGCHEIPPLKERGHECCLDKDDYYYYNSIRQEFNVSDVCVNWNQYYNV
CRTGNANPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQREHQLMQEQRARYLSSSTVASYTEPGDCYEEIFQYVCHI
VRKAKRRTLSLYNTLQDRRQGRMEPGSAKLGVNGKGQRHYRHCRKHNSLKYTPHALVQPI
AVTLTSDPNNCPRCHRVQREAARRLSILDSADSDQEEGGADEEQGEGRRGSEGASDLEKE
EEEGEEGGWLRLCGDLWREVRVKLRGIVDSKYFNRGIMIAILVNTISMGIEHHEQPEELT
NILEISNVVFTSMFALEMILKLAAFGLFDYLRNPYNIFDSIIVIISIWEIIGQSDGGLSV
LRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHIFGCKFS
LRTDTGDTVPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTSPWASLYFVALMTFG
NYVLFNLLVAILVEGFQAEGDANRSYSDEDQSSSNMEEFDKFLDSRDGSDPRLCAIPMTP
NGHLDPTLPSSNQPVAAGGVTSSARNSLQPDQILIALGSRKSSVMSLGRMTYDQRSLSSS
RSSHYGAWGRSGAWGSRRSSWNSLARGHSLKHKPPSAEHESLLSGERHRVADREREGMGR
APHHRRTLSLDTKDSCDLVELTSSVPSSHRAARKVGVALGTSEHQDCNGKMPNIAKEIFP
KMDNRKERGEDEEEIDYSLCFRIRKMIDVYKPDWCEIREDWSIYLFSPQNRFRILCQTII
AHKLFDYVVLAFIFLNCITIALERPQIEHRSTERIFLTVSNYIFTAIFVAEMTLKVVSLG
LYFGEQAYLRSSWNILDGFLVFVSLIDIVVSVASAGGAKILGVLRVLRLLRTLRPLRVIS
RAPGLKLVVETLISSLKPIGNIVLICCAFFIIFGILGVQLFKGKFYHCLGVDIRNITNRS
DCVAANYKWVHQKYNFDNLGQALMSLFVLASKDGWVNIMYNGLDAVAVDQQPVTNNNPWM
LLYFISFLLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRKAQRL
PYYATYCSVRLLIHSVCTSHYLDIFITFIICLNVVTMSLEHYNQPVSLETALKYCNYMFT
TVFVLEAVLKLVAFGLRRFFKDRWNQLDLAIVLLSVMGITLEEIEINAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLVCN
DENPCEGMSRHATFENFGMAFLTLFQVSTGDNWNGIMKDTLRDCTHDDRSCLSNLQFISP
LYFVSFVLTAQFVLINVVVAVLMKHLDDSNKEAQEDAEMDAEIELEMAHGLCPRSMGSPS
SGQGGGGGGGGRVDPEGHLCMRCFSPAQENLWLDSVSLIIKDSFDGELMIIDNLSGSVFH
HYSSPAMCEKCNHDKQEVQLAEMEGLSLNSDKSSSILLGDDLDNRSICQLSPKETKRGLE
CHVFPYWSHFTLMKNLLQGQQTGNEATLE
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgattctactgaactgtgttaccctggggatgtaccagccttgtgatgatatg
gactgcctcaatgaccggtgcaagatcttgcaggtatttgatgatttcatcttcatcttc
tttgcaatggagatggtgctgaagatggtggcccttgggatctttggcaagaagtgttat
cttggagacacctggaatcgcctggatttcttcattgtgatggctgggatggtggaatat
tccctggacctccaaaacattaacttgtctgcaatccgtactgtccgtgtcctgaggccc
ctcaaagccatcaaccgggtgcctagcatgcggatcctggtgaatttgctcctggacacc
ctgcccatgttggggaatgttctgcttctctgcttctttgtcttcttcatctttggcatc
atcggagtacagctgtgggctggtctgctcaggaaccgctgtttcatggaggagaacttc
acaatacaaggcgacatcattctccccccctactatcaacccgaggaggacgatgagatg
cccttcatctgctccctgtcaggagacaatggcatcatggggtgtcatgagatccccccg
ctgaaggagaggggccatgagtgctgcctggacaaggatgactattattactacaactcc
atcaggcaggagttcaatgtcagtgatgtgtgtgtcaactggaaccagtactacaacgtg
tgccgcacaggcaatgccaacccacataagggtgccatcaactttgacaatatcggctat
gcctggatcgttatatttcaggtgatcacactggaagggtgggtggagatcatgtattat
gtgatggatgctcattcgttctacaactttatctactttatcttgctgataatcgtgggc
tccttcttcatgatcaacctgtgcctggtggtcatagccactcagttctctgagaccaag
cagcgggagcaccagctgatgcaggaacagcgagcgcggtacttgtcctccagcaccgta
gccagctacaccgaaccaggagactgctacgaggagatcttccagtacgtctgccacatc
gtgcgcaaagccaagcgtcgcacacttagcctctacaacaccctgcaggaccgacgccag
ggccggatggagccaggcagtgccaagctcggtgtgaatgggaaaggacagagacactat
aggcattgccggaaacacaactctctcaaatacactcctcatgccctcgtccagcccatt
gctgtgaccctgacctctgaccccaacaactgccccagatgtcacagggtgcagcgtgag
gcagcccggaggctctccatcctggacagtgctgattcggaccaggaggaaggaggggcc
gacgaagagcaaggagaaggaagaagaggaagcgagggtgcctcagatctggagaaagag
gaagaggagggggaagagggcggatggctgaggctctgtggtgacctgtggcgagaagtg
agagtcaaactaagggggattgtggacagcaagtatttcaaccgtgggatcatgatagcc
atcctagtaaacaccatcagcatgggcattgagcaccatgaacagccagaagaactgact
aacatcttggagatcagcaatgttgtgttcaccagcatgtttgccctggagatgatcctg
aaactcgccgcgtttggcctctttgattacctccgcaatccctacaacatcttcgacagc
atcattgtcatcatcagcatttgggagatcattggccagtcagatggggggctgtcagtg
ctgagaactttccgcctcctgcgggtgctgaagctcgtgcgtttcatgcctgctctgcga
cgccagctggtggtgctgatgaagaccatggacaatgtggccaccttctgtatgctcctt
atgctcttcatctttatattcagcatcctgggaatgcacatctttgggtgcaaattcagc
ctccggacagacaccggagacactgtccctgaccggaagaatttcgactccctgctctgg
gccatcgtcactgtgttccagatcctgacccaggaggactggaatgttgtgctgtataat
ggcatggcctccacctcaccatgggcatccctttactttgtggccctcatgacctttggc
aactatgtcctcttcaatctgctggtggctatcctggtggagggcttccaggctgagggt
gatgccaaccggtcgtactcggacgaagatcagagttcatcaaacatggaggaatttgac
aaattcctggacagccgggatggctcagatcccaggctctgtgcaattcccatgacccca
aatggacaccttgaccccaccctaccttcttccaaccagccagtggcagctggtggggtc
acaagttccgcccggaattccctgcagccagaccagatcctcattgccctgggttccagg
aagagcagtgtgatgtcactagggagaatgacctacgaccagaggtcactgtctagctct
cgcagttctcactatggtgcatggggccgcagtggggcctgggggagccgtcgctccagc
tggaacagcctggctcggggacacagcctaaaacacaagcctccgtctgccgagcatgaa
tctctgctgtctggggaaaggcacagggtggcggatagagaacgagaggggatgggaagg
gcccctcatcaccggcggacgctctccctggacaccaaagattcctgtgatctggtggag
ctgacgtcatcagtcccatccagtcacagggcggcgcggaaggtgggtgtggctctgggc
accagtgagcaccaggactgcaatggcaaaatgcccaatatcgctaaggagattttcccg
aagatggacaaccgcaaggaacgtggagaggacgaggaggagatagactatagcctgtgt
ttccgcatccggaagatgatagatgtctacaagccagactggtgtgagatacgggaggat
tggtccatctatctcttctctccacaaaacaggttccgcatcctctgccaaaccatcatt
gctcacaagctctttgactacgttgttctggccttcatcttcctgaactgcatcaccatt
gccctggagagaccacagatcgagcatcggagcaccgagagaatctttctcaccgtatcc
aactacattttcacggcaatcttcgtagctgagatgacactaaaggtggtctctctaggc
ctatattttggggagcaggcctatctccgcagcagctggaacatcctagatggcttcttg
gtctttgtgtccctcattgacattgtggtctcagtggcctctgctggaggagctaaaatt
ttgggggtgctccgggtcctccgactgctgcgcaccctacgtcctctcagggtcatcagc
cgtgccccaggcctgaagctggtggtggagacactcatctcatccctcaaaccaattggg
aacattgtcctcatttgctgtgccttctttatcatcttcggcatcctgggtgtgcagctc
ttcaaggggaagttctaccactgcctcggggttgacatccgtaacatcaccaacaggtct
gactgcgtggccgccaattacaagtgggtacaccaaaagtacaactttgacaaccttgga
caggccctgatgtccctcttcgttctagcctccaaagatggttgggtcaatattatgtat
aatggactagatgctgtggctgttgaccagcagccagtgaccaacaacaacccctggatg
ctcctttacttcatctcgttcctcctcattgtcagcttcttcgtactcaacatgtttgtg
ggggtggtggtggagaacttccacaagtgccggcagcaccaggaggcagaggaggcacgc
cggcgggaggagaagcgcctcaggcgtctggagaagaagcgcaggaaggcgcagcgcttg
ccgtattatgccacctactgctctgttcgcctcctcatccattcggtctgcaccagccac
tacttggacatcttcatcaccttcatcatctgcctcaacgtcgtcaccatgtccctggag
cactacaaccagccagtgtctcttgagactgccctgaagtactgcaactacatgttcacc
acagtctttgtgctggaggcggttctgaagctggtggcgtttggactgcgacgattcttc
aaagaccggtggaatcagctggacctggccattgtgctgctatctgtcatgggcatcacg
ctggaggagattgaaatcaatgcagctctccccatcaaccccactatcatccgcatcatg
agggtgctgcgcattgcccgggtgctgaagctgctgaagatggcaacagggatgcgggcg
ttactggacacagttgtgcaagctctgccgcaggtggggaacctcggactgctcttcatg
ctcctctttttcatctacgctgctctaggagtggagctctttgggaagctggtgtgcaat
gacgagaacccctgtgagggcatgagccgccatgccacctttgagaactttgggatggcc
ttcctcacgctcttccaggtctccactggcgacaactggaatggaatcatgaaggatacc
ctgcgggactgcacccatgatgaccggagttgcctcagcaacctgcagttcatctcgcca
ctctactttgtcagcttcgtgctcacagcacagttcgttctcatcaacgtggtggtagct
gtgcttatgaaacacctcgacgacagcaacaaggaagcgcaggaggatgcggaaatggat
gccgagattgagcttgagatggcacacgggctctgcccccgcagcatgggctccccgagc
tcaggacagggaggaggaggtggaggaggtgggagagtggaccctgaaggacatctgtgc
atgagatgtttctctccagcacaggagaacttatggctggacagtgtctctttaattatt
aaggactccttcgacggggagttaatgatcatcgataacctatcgggctccgtcttccat
cattactcctcgccggccatgtgcgagaagtgtaaccatgacaagcaagaggttcagctg
gctgaaatggaaggcttatccctcaactcagacaagtcttcttccatcctgctaggggat
gatttagacaatcgcagcatctgtcagttgagtcctaaggagaccaagcgcggcctggag
tgccatgtattcccctactggtcacacttcactctcatgaagaatctccttcagggacag
cagactggtaatgaagcgacactggagtga
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integrated database retrieval system
