Trachemys scripta elegans (red-eared slider): 117887658
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Entry
117887658 CDS
T07347
Symbol
CPSF4L
Name
(RefSeq) putative cleavage and polyadenylation specificity factor subunit 4-like protein isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
117887658 (CPSF4L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117887658 (CPSF4L)
03019 Messenger RNA biogenesis [BR:
tst03019
]
117887658 (CPSF4L)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
117887658 (CPSF4L)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
117887658 (CPSF4L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_12
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_11
zf-CCCH_DUS3L
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
117887658
NCBI-ProteinID:
XP_034646211
LinkDB
All DBs
Position
14:complement(31581986..31589241)
Genome browser
AA seq
264 aa
AA seq
DB search
MQELIAGVEKLMFDLERDVEHQRGALLLPFPGMDKSGASVCEFFLRGLCAKGLMCPFRHI
SGEKTVVCKHWLRGLCKRGDLCEFLHEYDMSKMPECYFYSKFGECSNRECPFLHIDPASR
IKDCPWYDRGFCKQGPLCKYKHTRRVMCVNYLAGFCPEGPKCKFMHPKADLMQCNSDLSQ
GLPPPSRAVDGKSVHEQQAPEVLLLSHQPGARAAQCQRKKAQEAGGYPYGLLRPLGQVTC
FKCGEKGHYANKCSKSRLGIQLGK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcattgctggggtggagaagctcatgtttgatttagagcgggatgtggag
caccagcgaggggccctgctcctgcccttcccaggcatggacaagtcgggggcgtccgtg
tgtgagttcttcctccgaggactgtgtgcaaagggcctgatgtgtcctttccggcacatc
agcggggagaagacggtggtgtgtaagcactggctgcgggggctgtgcaagaggggagac
ctgtgtgagttcttgcacgagtacgacatgagcaagatgccggagtgttatttctactcc
aagttcggcgagtgcagcaatagagagtgccccttcctgcacattgatccagcgtccaga
attaaagactgtccctggtacgacagagggttctgcaaacagggtcctctgtgtaaatac
aaacacaccaggagggtgatgtgtgtcaactacttagctggcttctgccccgaaggaccc
aaatgcaaattcatgcaccccaaggcagacctgatgcagtgtaactcggatctctcccag
gggctgccaccgccatcccgggctgttgatggcaagagtgttcacgagcagcaggccccg
gaagtcctgttgctttctcatcagccgggggctagggctgcccagtgccagaggaagaag
gcacaggaggctggtggctacccctatggactgctccggccccttgggcaggtcacatgc
ttcaagtgtggagaaaagggtcactatgccaacaaatgcagcaagagtcggctgggaatc
caactggggaaatga
DBGET
integrated database retrieval system
