Trachemys scripta elegans (red-eared slider): 117887663
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Entry
117887663 CDS
T07347
Symbol
WIPI1
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04136
Autophagy - other
tst04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117887663 (WIPI1)
04136 Autophagy - other
117887663 (WIPI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117887663 (WIPI1)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117887663 (WIPI1)
Membrane trafficking [BR:
tst04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
117887663 (WIPI1)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117887663 (WIPI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_NWD2_C
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_WDR90_POC16_2nd
DUF5711
WDR55
Beta-prop_RSE1_2nd
Beta-prop_Vps41
BCAS3_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_2nd
RMC1_N
Motif
Other DBs
NCBI-GeneID:
117887663
NCBI-ProteinID:
XP_034646227
LinkDB
All DBs
Position
14:complement(29046409..29078119)
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AA seq
437 aa
AA seq
DB search
MEAAAGAGPAEAPEALSCFSYNQDCTSLAIGTKTGYRLFSLSSVEQLDQVHENNEIPDVY
IVERLFSSSLVVVVSHTKPRQMNVYHFKKGTEICNYSYSSNILSIRLNRQRLIVCLEESI
YIHNIKDMKLLKTILDTPPNTTGLCALSINHSNSYLAYPGSATIGEIVFYDGNNLRTVCT
IPAHDGPLAAITFNSTGSKLASASEKGTVIRVFSVPDGQKLYEFRRGMKRYVNISSLVFS
MDSQFLCASSNTETVHIFKLEHTTDSRPEEPPTWSGYMGKMFMAATNYLPAQVSDMMNQD
RAFATVRLNFSGQRNICTLSTIQKLPRLLVTTSDGHLYIYNLDPQDGGECVLIKKHSLLG
SGKTDENKENDLRPPLPQSYAATVARPSTMPSSSSRPGYSEDGGALRGEVIPEHEFATGP
VRLDDENEFPPVSIRSP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgcagctggagccggcccggccgaggcgcccgaggcgctgagctgcttctcc
tacaaccaggactgcacctccctggccatcggaaccaaaactggatacaggcttttctcc
ctaagttctgtggaacagttggaccaagtccatgaaaacaatgaaatcccggatgtttac
atcgtggagcgcctcttctccagcagcctggtggtcgtggtgagtcacaccaagcctcgg
caaatgaacgtctatcacttcaaaaaagggacggagatctgcaactatagctattccagc
aacatcctgtccatccggctgaatcggcagaggctgattgtttgcctggaggagtcgatt
tatattcataacattaaggacatgaagcttttgaagacaatcctggatacccctccgaat
acaacaggtttatgtgcactttctatcaatcattccaactcctacttggcgtaccctggc
agcgcgactattggggagattgtgttttacgacggaaataatttgagaacagtctgcaca
attcctgcccacgatgggcccctcgctgcaataaccttcaactccacaggatcgaagtta
gcaagcgcttcagaaaaaggcactgtcattcgtgtattttccgtacctgatgggcaaaaa
ctctacgaattcagaagaggaatgaagaggtacgtgaacatcagctctctcgtgttcagt
atggactcccagttcctgtgtgcttcgagtaacaccgagaccgtgcacatctttaaactg
gaacataccactgacagccgtccagaagagcctcccacctggagtggttacatgggaaag
atgtttatggctgctaccaactacctccctgctcaagtgtcggacatgatgaaccaggac
cgagcctttgccactgtgcgcttgaatttctctggacaacggaacatctgcacgctctcc
acgattcagaagctgccacgactcttagttacaacatcagacggacacctttacatctac
aacctagaccctcaagacggaggagagtgcgtcttaattaagaaacacagcctgctcggc
tcgggaaagacagacgagaacaaagaaaatgacctccggcctccattacctcagtcttac
gcagcaaccgtagcccgaccaagtacgatgccttcatcttcatccaggccaggttactca
gaagatgggggtgccctgcgaggagaggttatcccagagcacgaatttgcaaccggacca
gtgcgtcttgatgacgagaatgaattccctcctgtgagcattaggagtccctaa
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