Trachemys scripta elegans (red-eared slider): 117887725
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Entry
117887725 CDS
T07347
Symbol
ALCAM
Name
(RefSeq) CD166 antigen isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117887725 (ALCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tst04515
]
117887725 (ALCAM)
04090 CD molecules [BR:
tst04090
]
117887725 (ALCAM)
Cell adhesion molecules [BR:
tst04515
]
Immunoglobulin superfamily
ALCAM
117887725 (ALCAM)
CD molecules [BR:
tst04090
]
Proteins
117887725 (ALCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
Ig_2
ig
I-set
V-set
C1-set
Podoplanin
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117887725
NCBI-ProteinID:
XP_034646328
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Position
1:155082713..155243992
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AA seq
627 aa
AA seq
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MMETPAAASCTHRPLLCLLLLAALCLRPGLGLYTVNAVYGDTIVMPCSQGVPNDLMFGKW
KYETANNSPVFIAFRSTTKKQVQYDDVAEYKGRLSLSENYTLSIKNARISDERRFVCMLV
TEDNVYEEPTVVKVFKQPSQPEIIHPANFLETEKLKMLGECIARESYPDGNITWYKNGNI
LQPVEGVVVMTLQKVVDPSTGLFTTTSSLQYMPTKKDANAQFACKVTYYGPSGQEEISSE
PVVFDVQYPTAKVTIRVLSQRNTIKEGDNITLKCSGNGNPPPQEFLFYIPGEPEGIRSSD
TYIMTDVRRNATGEYKCSLIDGSMEDSTTITVHYLDLSLTPSGEVTKQIGEDLPVSCTIS
SSRNATVFWIKDNTRMQTSPSFSSLQYKDAGNYICETTLQEVEGLKKRKTLTLIVQGKPQ
IRMTKKTGSNKSKTIICHVEGFPKPAVQWTTTGSGSIINQTEETNYIHGSFSSKIVISPE
ENVTLTCIAENQLERTVTSMNVSAISIPEYDEPNGYDNSEKVNDQAKLIVGIVVGLLLAA
LVAGGIYWVYVKKSKPLPRTVSHFLNPPSNSYSPNLCPQSDVNGKSEKAAAQNFQTLVRT
PSKHVNKDLGNIEENKKLEENNHKPEA
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgatggagaccccggcagccgcctcctgcacccaccgcccgctgctctgcctgctgctg
ctcgctgccctctgcctgcggccaggccttggattgtacacagtaaatgcagtatatgga
gataccattgttatgccttgttctcaaggagtacctaatgacctgatgtttggaaaatgg
aaatatgaaacggcaaacaactctccagtatttattgccttcaggtcaacaacaaaaaaa
caagttcaatatgatgacgtagccgaatacaaaggcagattgagcctctcagaaaattat
accttatccatcaaaaatgcaaggatcagtgatgaaagaagatttgtatgtatgctagta
actgaggacaacgtgtatgaagagcctacagtagtcaaggtgttcaaacaaccatctcaa
ccagaaattatacatccagcaaacttcctagaaacggaaaagcttaaaatgctcggggaa
tgtattgcaagagagagttatccagatggcaacattacatggtacaaaaatggaaatatt
ttgcagcccgttgaaggagttgttgtcatgaccttacaaaaggttgtggacccatcaact
ggactcttcaccacaacatcttctctccagtacatgccgacaaagaaagatgcaaatgca
cagtttgcctgtaaagtgacatattatggaccatctggacaggaagaaatatcatctgaa
ccagtggtctttgatgttcagtatcctacagcgaaggtgacaattagagtgctgtcacaa
agaaataccatcaaagaaggtgataacatcactctaaagtgctcaggaaatggtaacccc
cctccacaggagtttttgttttatattccaggagaacccgaaggcataagaagctcagat
acttacataatgacagatgtgagacgaaatgcaacaggagaatacaaatgctctctgatt
gatggaagcatggaggactcaaccactatcactgttcattatttggatttatcacttact
cctagtggagaggttactaaacagattggagaagatctgcctgtatcatgcaccatctct
tccagtagaaacgcaactgtgttttggataaaggacaataccagaatgcagacaagtccg
tcattttcaagtctacagtacaaggatgctggaaactacatctgcgaaactactctacag
gaggttgaagggttaaagaaaaggaaaacacttacacttattgtgcaaggaaaacctcaa
atcagaatgacaaagaaaaccgggtcaaataaatctaaaacaataatctgccacgtggag
ggttttcccaaaccagctgtgcaatggacaactactggtagtgggagcatcataaatcaa
acagaggagactaactacattcatggaagtttttccagtaaaattgtaatttctcctgaa
gagaatgttacattaacttgtattgctgaaaaccaactagaaagaactgtcacctcgatg
aatgtctctgccataagtatcccagaatatgatgagccgaatggatatgacaacagcgaa
aaggttaatgaccaggcaaagctaatagtaggaattgtggttggtcttctgctagcagct
ctggttgctggtggtatctactgggtatacgtgaagaaatcaaagccactccctcgaaca
gttagtcactttttgaacccaccctcgaacagttattcacctaatctctgcccccaaagt
gacgtcaatggaaagtctgagaaggcagcagcacagaactttcaaaccctcgtgaggaca
ccatcaaaacatgtaaacaaagaccttggaaatatagaggaaaataaaaagctagaagaa
aacaatcacaaacctgaagcttaa
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