Trachemys scripta elegans (red-eared slider): 117887731
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Entry
117887731 CDS
T07347
Symbol
TRIM16
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117887731 (TRIM16)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117887731 (TRIM16)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117887731 (TRIM16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
117887731
NCBI-ProteinID:
XP_034646331
LinkDB
All DBs
Position
14:complement(15032504..15046784)
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AA seq
600 aa
AA seq
DB search
MADCGPAAPEGLPQELLLGGPITKAKGHKVCEGNDLPGEKTEGEELNGRESPEATSPGPD
VQGSLIVNGSEMAMGQPGLLEQGNILEDGQEILCDFCMAQKVLAVKSCLTCMVNYCEDHL
RPHLENSKLRSHKLMNPAKDIDLQTCETHKGHLGWFCQTDLVCVCEECLAEEHKGHNSLT
CEAARKDNESELLQTQAEYDWKLKSAENAIVKLQNNTQSIVSSISEVKSLVSRQFGELLE
AVKMAHSDVLAFLEEKERVAVNQANGIKIHLEHKRAAMEENKLRLEKMALYTSDILFLKE
YCELKKNTGDDALPSVYIGLKDKLSGIRRVISESTEHLLQLVQTTYKEKLQEFAKEEDCG
IKTMVSAIVPSRHRISAPDPETRSDFLKYSCPLTFDSVTAHRYLRLLEDNHKVTNTTPWE
HSYPDHPERFEHWRQVLSNNSLYMGRYYFEAEISGAGIYIGMTYKSIDRKGSESNSCISG
NNFSWSIQWHGKGFSAWHSDVETPLKTDTFNRIGVYLDYPKGTLSFYGVTLDTMTLIHKF
ECEFAEPLYPAFWLSKKENSIRIIKAGDADEKTPASSASSEEAAPSNTCLVSEVEALAST
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggctgactgtggccccgctgctccagaagggctgccccaggaattgttactaggcggc
cctatcactaaggcaaaagggcacaaggtctgtgagggcaatgacctcccaggtgagaaa
actgagggtgaagagttgaatggccgtgaaagcccagaagccactagcccaggacctgat
gtgcagggcagtttgattgtaaatggctctgagatggcaatgggccagcctggccttctg
gagcaggggaacattctggaggatgggcaagagatcctgtgtgacttctgcatggcccag
aaggtcctggcagtgaagtcctgtttgacctgcatggtgaattattgcgaggaccacctc
cggcctcacctggagaacagcaagctgcggagccacaagctgatgaaccccgcaaaggac
attgacctacagacctgtgagactcacaaaggccacttggggtggttctgccagaccgac
ctggtgtgtgtctgtgaggagtgcctggccgaagagcacaaggggcacaactcactcacc
tgtgaggcagccaggaaggacaatgagagtgaacttctgcagacccaagcagagtacgac
tggaaactgaagtctgctgaaaacgcaattgtcaagttgcagaataatacacagtctata
gtgagttctatctccgaagtgaagagcctggtgtccaggcagtttggggagcttttggaa
gccgtcaagatggcccattcggatgtactggcatttctagaggagaaggagcgtgtggcg
gtgaatcaagccaacgggataaagatccatctggagcacaagcgtgctgccatggaagag
aataaactcaggctggagaagatggccctctacaccagtgacatcctgttccttaaggaa
tattgtgagctcaagaagaacacgggggatgacgcgcttcccagtgtttatattggactc
aaagataaactgtcagggatcagaagggtcatctcagagtcaacagaacacttgctacag
cttgtacaaaccacctataaggaaaagctccaggagtttgcaaaggaagaggactgtggg
atcaaaacgatggtgtctgcaattgtaccatccaggcaccgcatatcggctccagatcca
gagactaggagtgactttctcaagtactcatgcccgttaacgtttgactcagtcacagcc
cacagatatctcaggctcttggaggacaaccacaaagtgactaacaccacaccctgggaa
cactcctacccagatcaccctgaaagatttgagcactggcgccaggtgctgtcaaacaac
agcttgtacatgggtcgctactactttgaggctgaaataagcggagccggcatttacatt
ggtatgacgtacaaaagcattgaccggaaggggtcagaaagcaacagctgcatctcgggg
aataacttctcctggagcatccagtggcatggcaaggggttctctgcatggcacagtgat
gtggagacgccactgaaaacagacacgttcaataggataggggtctatctggactacccc
aagggcactttgtccttctatggtgtcaccttggacaccatgactctgatacacaagttt
gagtgtgaatttgctgagccgctctaccctgctttctggctttcgaagaaagaaaactcc
atcagaataatcaaagcaggggatgctgatgagaagactcctgcctcttctgcttcctca
gaggaagctgctccttccaacacatgtttagtgtctgaggtggaagcattggccagtact
tag
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integrated database retrieval system
