Trachemys scripta elegans (red-eared slider): 117887739
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Entry
117887739 CDS
T07347
Symbol
USH1G
Name
(RefSeq) Usher syndrome type-1G protein isoform X1
KO
K21878
Usher syndrome type-1G protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
117887739 (USH1G)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117887739 (USH1G)
Cilium and associated proteins [BR:
tst03037
]
Primary cilia and associated proteins
USH complex and associated proteins
117887739 (USH1G)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_3
Ank_5
SAM_1
SAM_2
SAM_7
DUF19
Motif
Other DBs
NCBI-GeneID:
117887739
NCBI-ProteinID:
XP_034646341
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All DBs
Position
14:21176881..21193979
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AA seq
469 aa
AA seq
DB search
MNDQYHRAARDGYLDLLKEATRKDLNSPDEDGMTPTLWAAYHGNLEALRLIVSRGGDPDK
CDIWGNTPLHLAAANGHLNCLSFLVSFGANIWCLDNDYHTPLDMAAMKGHMECVRYLDSI
AAKQSSLNPKLVSKLKDKAFRDAERRIKDCVKMQKKHHERMEKRYKKEMSDNSDTMSFSS
YSSSTLSRKFQHMSMVTSLPYSQATLHGTAKGKTKMQKKLEKKKQVDGTFKIYEDGRKSV
RSLSGLQLGNDVMFVKQGTYASPKEWTRCNIRDMFLTDEDTVSRAISDPGLHIDSAHSEV
STDSGHDSLFNRPGLGTMVFRRNYVSSGLFGIGQEDASVLGEGNLDGVGVKLRSRLQRSP
SLNDSIGSANSLQERNAEELPWEEVELGLDDDNEPETSPLEAFLASLHMSEFISILKKEK
IDLEALMLCSDNDLKSINIPLGPRKKILDAIQRRKQTLERPDVIADTEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccagtaccaccgagcagcccgagatggctacctggacctgctaaaggaagcc
accaggaaggacctaaactcgcccgacgaggatggcatgaccccgaccctctgggctgct
tatcacggcaacttggaagcgctgaggctgatagttagcagagggggtgatccagacaaa
tgtgacatctgggggaacacacctcttcacctagcggcagccaatggccatctgaactgc
ctctccttcctggtgtcatttggggccaacatctggtgtctggacaatgactaccatacg
ccactggacatggctgccatgaagggacacatggagtgcgtgcggtacctagactccatt
gccgccaagcagagcagtctcaaccccaagctggtgagcaagctgaaggacaaggctttc
agagatgcagagaggaggatcaaggactgcgtgaagatgcagaaaaagcaccacgagcgg
atggagaagaggtacaagaaggagatgtctgacaactccgacaccatgagcttctccagc
tactctagcagcactctgagcaggaagttccagcacatgtccatggtgacgtccctgcca
tattcccaagccaccctccacggcacagccaagggcaagaccaaaatgcagaagaagctg
gagaagaagaagcaggtggatggaacgtttaagatctacgaggatgggaggaaaagtgtg
aggtccttgtcgggcttgcagctggggaacgatgtcatgtttgtgaagcagggcacctat
gccagcccgaaggagtggacccggtgcaacatcagggacatgtttctaacggacgaagat
accgtctcccgtgccataagcgacccaggtttgcacatagactcagcccactcggaggtc
agcacggattctggccatgactcattgtttaaccggcctgggctcggcaccatggtgttc
cggaggaactacgtcagcagcgggctctttgggatcggccaggaggatgccagcgtgctg
ggcgagggcaacctggatggggtaggtgtcaaactgcggagccgcctgcagcgctcgcca
agtctcaacgacagcatcggcagtgccaacagcctgcaggagaggaacgcagaggagctg
ccctgggaggaggtggagctgggcctggatgatgacaatgaacccgagaccagtcccctg
gaggccttcctggcttccctgcacatgtctgagttcatctccatcctgaagaaagagaag
atcgacctggaggccctcatgctgtgttcagacaatgacctgaagagcatcaacatccca
ctggggcctaggaaaaagatattggacgccatccagaggaggaagcagaccttggagagg
cctgatgttattgcagacaccgagctatag
DBGET
integrated database retrieval system
