Trachemys scripta elegans (red-eared slider): 117887821
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Entry
117887821 CDS
T07347
Symbol
SMURF2
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04120
Ubiquitin mediated proteolysis
tst04137
Mitophagy - animal
tst04144
Endocytosis
tst04340
Hedgehog signaling pathway
tst04350
TGF-beta signaling pathway
tst04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117887821 (SMURF2)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117887821 (SMURF2)
04350 TGF-beta signaling pathway
117887821 (SMURF2)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117887821 (SMURF2)
04137 Mitophagy - animal
117887821 (SMURF2)
09144 Cellular community - eukaryotes
04520 Adherens junction
117887821 (SMURF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117887821 (SMURF2)
04121 Ubiquitin system [BR:
tst04121
]
117887821 (SMURF2)
03029 Mitochondrial biogenesis [BR:
tst03029
]
117887821 (SMURF2)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117887821 (SMURF2)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117887821 (SMURF2)
Autophagy
Mitophagy
Other mitophagy associated proteins
117887821 (SMURF2)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
HECT type E3
117887821 (SMURF2)
Mitochondrial biogenesis [BR:
tst03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117887821 (SMURF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117887821
NCBI-ProteinID:
XP_034646449
LinkDB
All DBs
Position
14:complement(27003029..27092529)
Genome browser
AA seq
773 aa
AA seq
DB search
MSNQGARRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDLCKL
GPNDNDTVRGQIVVSLQSRDRIGTGGQVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCFVDENTPVTGTNGATCGQSSDPRLAERRVRSQRHRN
YMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLP
PGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLKGVATVMSWGGRCHPMEEICHP
SRQNQLKDHQQQQQVVSLCQLPDEAECLTVPRYKRDLVQKLKILRQELSQHQPQAGHCRI
EVSREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNPYYG
LFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGK
PITLDDMELVDPDLHNSLVWILENDITGVLDHTFCVEHNAYGEIIQHELKPNGKSIPVTE
ENKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVN
DWKANTRLKHCTPDSNIVKWFWKAVELFDEERRARLLQFVTGSSRVPLQGFKALQGAAGP
RLFTIHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYEKLLTAIEETCGFAVE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccagggggcccggaggaacgggcccgtcaagctgcgactgacagtactatgt
gcaaaaaacttggtgaaaaaggattttttccgacttcctgatccatttgctaaggtggtg
gtcgacggatctggccaatgccattctacagatactgtgaagaatacgcttgatccaaag
tggaatcagcattatgacctatatattgggaagtcagattcaataacaatcagtgtatgg
aaccacaagaaaatccataaaaaacaaggagctggttttctgggttgtgtgagacttctt
tcaaatgcaatcaaccgccttaaagacactggttatcagaggttggatctatgcaaactt
gggccaaatgacaatgatacagttagaggacagatagtagtaagtcttcaatccagagac
cgaataggcacaggaggacaagttgtggattgcagtcgtttatttgacaatgatctacca
gatggttgggaggagcggagaactgcctctggaaggatccagtatttaaatcacattaca
cggacaactcagtgggagcgaccaacacgaccagcatctgaatattctagtccaggcaga
cctctgagctgctttgtggatgagaacacaccagttacaggaacaaatggtgcgacatgt
ggacagtcatcagatcccagattggcagagagaagagtcaggtctcaaaggcataggaat
tacatgagcagaacacatttacatactcctcctgacctgcctgagggatatgagcaaagg
acaactcagcaaggtcaggtctatttcctgcatactcagaccggtgtaagcacatggcat
gacccaagagtaccaagggatcttagcaacatcaattgtgaagagcttggtccactgcct
cctggatgggagatccgtaatacagcaacaggcagagtttattttgtcgaccataacaac
agaacgacacagtttacagatccgcggctatctgctaatttgcacttagttttaaagggc
gtggccactgtgatgtcatgggggggcaggtgccatccaatggaagagatctgccacccc
agccgtcagaaccaacttaaagatcatcagcagcaacagcaggtagtatcattgtgccag
cttccagatgaggcagaatgtctgactgtgccaaggtataagcgagacctagtgcagaaa
ctcaagattctgaggcaagaattgtcacagcaccaaccccaagctggccactgtcgtatt
gaagtctccagggaagagatttttgaggagtcttacaggcaagtcatgaagatgaggccg
aaggacctgtggaagcgattaatgataaaatttcgtggagaagaaggccttgattatgga
ggggttgccagggaatggctttacctgttgtctcatgaaatgttgaatccatattatggc
ctcttccagtattcacgagatgatatctatacgctgcaaatcaacccagactctgcagtt
aacccggaacacttatcatatttccattttgttggacggattatggggatggctgtgttt
catggacattatattgatgggggcttcacattgcctttctataagcaattgctaggaaag
ccaattactcttgatgacatggaattggttgacccagatcttcataacagcttagtctgg
atactagagaatgatattacaggcgtcttggaccatacgttctgtgtggaacacaatgct
tatggggaaattattcaacatgaactgaaacccaatggcaaaagcatcccagtcacagag
gaaaataaaaaagaatatgtcaggctttatgtaaactggcggtttttacgaggaattgaa
gctcagtttctagcactgcagaagggatttaatgaagtcatcccacaacatctgttgaag
acatttgatgagaaggagttagagctcatcatttgtggacttggaaagattgatgttaat
gactggaaggcaaatactaggttaaaacactgtactccagacagcaacattgtgaaatgg
ttctggaaagctgtggagctcttcgatgaagagaggagagcacgattgctccagtttgtg
accggctcatccagagtgcctcttcagggttttaaagcattacaaggtgctgcggggccc
aggctatttacaatacaccagattgatgccagcactaataacttgccgaaagctcatacc
tgctttaatcgaatagacattcctccctatgaaagctatgacaagctgtatgagaagctg
ctaaccgccattgaagaaacatgtgggtttgctgtggaatga
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