Trachemys scripta elegans (red-eared slider): 117887904
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Entry
117887904 CDS
T07347
Symbol
RNF34
Name
(RefSeq) E3 ubiquitin-protein ligase RNF34 isoform X1
KO
K20804
E3 ubiquitin-protein ligase RNF34 [EC:
2.3.2.31
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117887904 (RNF34)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
117887904 (RNF34)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
117887904 (RNF34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP_RNF34_RFFL
RNF34L-like_3rd
zf-C3HC4_3
FYVE_CARP1-2
ARMET_C
SAP
Prok-RING_4
zf-C3HC4_2
zf-RING_5
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
117887904
NCBI-ProteinID:
XP_034646542
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All DBs
Position
15:complement(7160972..7175763)
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AA seq
378 aa
AA seq
DB search
MDDQNVPSGLICWRVKERRACSGPVSLKAGATSMWASCCGLLNEVMGTGAVRGQQPGFGG
GTGPFRFAPNTDFSAYPSSGANIVCKACGLSFSVFRKKHVCCDCKKDFCSVCSVLQENLR
RCSTCHLLQETAFQRPQLMRLKVKDLRQYLILRNIPTDTCREKEDLVDLVLCHHGLGSED
TDTSSLHSSRSQTSSFFTHPFSLSVSVSSSQELTNRRGSTENGTPVQGQSGMPSSNNEEE
EEEDDAEEQTPSMSRKRARASLSDISSLEDIEGLSVRQLKEILARNFVNYSGCCEKWELV
EKVSRLYRESEENHRTQGEKMQLTENDDNLCRICMDAVIDCVLLECGHMVTCTKCGKRMS
ECPICRQYVVRAVHVFKS
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggatgatcagaacgtcccttctggccttatctgctggagggtgaaggagaggcgagcc
tgctctgggccagtttcactgaaggcgggagccacatccatgtgggcttcctgctgtggg
ttgctgaatgaagtcatgggtaccggagctgtccgtggccaacagccaggatttggggga
ggtactggcccattcagatttgcaccaaatacagacttctcagcatatccatcttcagga
gccaatatagtctgcaaagcctgtgggctttcattttcagtttttaggaaaaagcatgtg
tgttgtgactgcaagaaggatttttgctcagtttgttcagtcttacaagaaaatctcaga
agatgttctacttgtcacttgttacaagagactgcatttcagcggcctcagttaatgcga
ttgaaagtcaaggatctgcgtcagtatctgatccttagaaacataccaacagatacttgt
cgagaaaaagaagacttggtggatcttgtactctgccatcatggattaggttctgaggat
acagacactagtagcttgcattcttcaaggtcacagacttctagtttttttacacatcca
ttttctctgtctgtatcagtgtcgtcctctcaagaacttacaaatagaagaggaagcaca
gaaaatggaacacctgtacagggacaaagtggaatgccttcttcaaataatgaagaagaa
gaagaagaagacgacgcagaagagcagacccctagcatgtccagaaagcgagcaagagca
tcattgtctgatatttcaagtctggaagatattgaagggttaagtgttcgacagctgaag
gaaatacttgctcgaaattttgtcaactattcaggatgctgcgaaaaatgggaacttgtg
gagaaagtgagcaggctgtacagagagagtgaggaaaatcacaggacacagggagagaag
atgcaactgactgagaacgatgataatctgtgtaggatctgcatggatgcagtaattgac
tgtgttcttctggaatgtgggcacatggtcacttgcacaaagtgcggcaaaagaatgagt
gagtgtcccatctgtagacagtatgttgtacgagcagtgcatgtatttaaatcttaa
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integrated database retrieval system
