Trachemys scripta elegans (red-eared slider): 117887983
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Entry
117887983 CDS
T07347
Symbol
SBNO1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117887983 (SBNO1)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117887983 (SBNO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Peptidase_M16_C
Helicase_C
Motif
Other DBs
NCBI-GeneID:
117887983
NCBI-ProteinID:
XP_034646798
LinkDB
All DBs
Position
15:complement(8082072..8126285)
Genome browser
AA seq
1389 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDPADMGLATPVPAVQQSVPLSALELGLETEATVA
VKQEPETVSTPALLNVRQPPSTTTFVLNQINQLPTLGTTIVMTKTTPVTTTRQTITVAKI
IQTSTTTRPSVAAPAVRNALTTTPSKDQVQLKDLLKNNSLNELMKLKPPPNIAQPVATAA
TDLSNGAVKKEASTKEVTRIWVNDVKMRSYSPTMKVPVIKEEEEPEEEDEEEMGHAETYA
EYMPIKLKIGLRHPDPVVETSSLSSVTPPEVWYQTSISEESIDNGWLSALQLEAITYAAQ
QHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRAIWFSVSNDLKYDAERDL
RDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQLLH
WCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGASEPR
NMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFSGVTF
KIEEVLLSQNYIKMYNKSVKLWVNAREKFQQSADLIDAEQRMKKSMWGQFWSAHQRFFKY
LCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGVLQS
LIEKHFPAPDRKKLFSLLGIDLTAQSNNNSPRDSPCKENKIKKRKGEEITRETKKARKTS
GLAGSSSDESESESDASDNEESDNESSKFLSSGDDDDFNPFRDESSEDDEDDPWLIRKDH
KKNKDKKKKKSIDPDSIQSALLASGLGSKRPSSLSSVAVTTASSTNTSANSNTNSSFVTS
QDAVERAQQMKKELLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSNDDGS
ISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRRVHMT
LELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALTHGDR
RATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPADYPGEFFKDVRQGLIGVGL
INVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFSDTLNAVIQNAKKNGRYDM
GILDLGSGDEKVRKADTKKFLTPGYSTSGRVELYTISVERGMSWEEATKIWAEQTGPDDG
FYLSSQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLETYADLKKKYKKVPSEDALP
HWLEQYNSSADTCTHAYWRGNCKKASLGLVCEVGLRCRTYFVLCGSVLSVWTKVEGVLAS
VSGTNVKMQIVRLRAEDGQRIVGLLIPANCVSPLVNLLSTSDQSQQLAVQQQQIWQQHHP
QSITNFNNA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccaggacaagatctgttgcttgctgctttgagtgagagtggaatcagtcca
aatgatctgtttgatattgaccctgcggacatgggccttgcaacaccagtgccagctgtt
cagcagtcagtgccacttagtgcattagaactaggcttggagactgaggcaacagttgct
gttaaacaagaaccagagactgtatctactccagcactattaaatgtcaggcaaccacca
tcaaccacaacctttgtgctgaatcaaataaatcagcttccaactttggggactacaata
gtaatgacaaaaaccacacctgtgacaactactaggcagaccatcactgtagcaaaaatc
attcaaaccagcacaactactcgaccatctgttgcagcaccagcagtacgcaatgccttg
accactacaccttcaaaggaccaggtccagctgaaagatctgctcaaaaacaatagtctt
aatgaactaatgaaattgaagccacctccgaacattgcccagccagttgcaacagcagcc
actgatctaagcaatggtgctgtaaagaaggaggcttctacaaaagaagtaacaagaata
tgggtaaatgatgtaaaaatgagaagttattcacctactatgaaagtgccagtaataaaa
gaggaagaggaacctgaggaggaggatgaagaagaaatgggtcatgcagagacatatgca
gagtatatgccaataaaattaaaaattggtctacgtcatcctgatccagtagtagaaaca
agttcattatccagtgtaacccctcctgaagtatggtatcagacatcaatatctgaagaa
agtattgataatggttggctgtcggcattgcaacttgaagcaattacttatgcagcccag
caacatgaaacattcctgcctaatggggacagagctggattcttgataggtgatggtgct
ggtgtaggaaaaggaaggaccatagctggaataatctatgaaaattacctgttgagtaga
aaaagagctatatggtttagtgtgtcaaatgatctgaaatatgatgctgaaagagacttg
agggacattggcgcaaaaaatattttggttcattccttaaacaagttcaaatatggaaaa
atttcttcgaaacataatgggagtgtaaagaaaggtgtaatttttgccacatactcttct
cttattggtgaaagtcaatctggtggtaaatacaaaaccaggttaaagcagcttctccac
tggtgtggcgatgactttgatggagttatagtatttgatgaatgtcacaaagctaagaat
ctgtgtcctgttggttcttcaaaaccaacaaagaccggcttagctgtattggagcttcag
aataaacttccgaaggctagagttgtttatgctagtgccacaggtgcgtctgagccacga
aatatggcatacatgaaccgtctgggaatatggggtgaaggaaccccatttagggaattc
agtgactttattcaggctgttgaaagaagaggtgtaggtgccatggaaatagttgctatg
gatatgaaactgagaggaatgtacatagcaagacagttaagcttttcaggtgtgaccttc
aaaattgaagaagttctactttcacagaactacattaaaatgtataataaatctgtgaaa
ctgtgggtgaatgccagagagaaatttcaacaatcagctgatcttattgatgcagagcaa
cgcatgaaaaagtctatgtggggtcagttttggtcagcccaccagagatttttcaagtac
ctctgcatagcatccaaagtcaaaagggtggtacagctagctagagaagaaatcaagaat
gggaaatgtgttgttattggactacagtccacaggagaagcaagaacgttagaagcctta
gaggagggcggtggagaattgaatgactttgtttccacagcaaaaggagtattgcagtct
ctcattgagaagcacttcccagctcctgacaggaagaagctttttagtttgctgggaata
gatctgactgctcaaagtaataacaattcacctagggacagtccttgcaaggagaataaa
ataaagaaacggaaaggtgaggaaataactagagaaaccaagaaagctcgtaaaacaagt
ggcctcgctgggagcagttccgatgagagtgaaagcgagtctgatgcctcagacaatgaa
gaaagtgacaatgagagctctaagtttttgagttctggagatgatgatgacttcaaccca
ttcagagacgaatctagtgaggatgatgaagatgacccctggttaattagaaaagaccat
aagaaaaataaagacaagaaaaagaagaaaagtatagacccagattccattcagagtgcc
ttattagcttctggtcttggatcaaaacgacctagcagtctttcttccgttgctgttacc
actgcttctagtaccaatacatcggctaacagtaatactaacagcagctttgtaacaagt
caagatgctgttgaaagagcccagcagatgaaaaaagaattgcttgataaactggaaaaa
ctagctgaagaccttcctcctaatactttggatgaacttatagatgaacttggtggtcct
gagaatgtggctgagatgacaggccgcaaagggagagttgtaagcaatgatgatggcagc
atatcttacgagtcaaggtctgaacttgatgtacctgttgaaattttaaatatcacagaa
aagcagagattcatggatggagacaagaacattgccatcatctcagaagctgccagctca
ggtatttcattacaagccgaccgtagggctaaaaatcagaggcggagagtgcacatgact
ttggagttaccatggagtgcagatagagcaatacagcaatttggaagaactcacagatca
aaccaagttactgcaccagagtatgtgttcctaatttccgaattggcaggagagcaaaga
tttgcatctatagttgccaaaagattagagagcttgggagctctcactcacggtgacaga
agagcaacagaaactcgagaccttagcaggttcaactttgacaacaagtatgggagaaat
gctttggagatagttatgaaatccattgtgaatttagattccccaatggtgtccccacct
gctgactatcctggagaattttttaaagatgttcggcaaggattaataggtgtgggccta
ataaatgtagaagaccgatcaggaattctgacacttgataaagattacaacaatatagga
aagttcctgaatagaattctgggtatggaggtgcatcagcagaatgctttattccagtat
ttttcggatacgttaaatgcagttatacaaaatgctaaaaagaatggaagatatgacatg
ggtattttagatcttgggtctggagatgagaaggtcagaaaggcagatactaagaagttt
ttaactccgggatactctacctctggacgtgtagaattatacacaatcagtgtagaaaga
ggtatgtcttgggaagaagcaactaagatttgggctgagcaaactggaccagatgacgga
ttttatttatcttcgcaaataagaaataataagaaaactgctatcttggtaaaggaagtg
aatcccaaaaagaagcttttcttagtatacagaccaaacactggaaaacaactcaaattg
gaaacgtatgcagacctgaaaaagaaatataagaaggtaccttctgaagatgctctacca
cattggctagagcagtacaattcatcggcagatacctgtacccatgcttattggagaggc
aattgtaagaaagcaagcctgggattagtttgtgaagtgggcctccgctgtcgaacttac
ttcgtcttgtgtggttcagtactaagtgtctggacaaaagtggaaggagttctagcctct
gtgagtggtacaaatgtgaaaatgcaaatagttcggctaagggcggaggatggacagagg
attgtaggtttgctcattcctgcaaattgcgtatcgccccttgtaaacctcctgtcaaca
tcagaccagtctcaacagcttgcagtacaacagcagcagatatggcagcaacatcaccca
cagagcatcaccaacttcaacaatgcataa
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integrated database retrieval system
