Trachemys scripta elegans (red-eared slider): 117888034
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Entry
117888034 CDS
T07347
Symbol
SCARB1
Name
(RefSeq) scavenger receptor class B member 1
KO
K13885
scavenger receptor class B, member 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03272
Virion - Hepatitis viruses
tst04145
Phagosome
tst04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117888034 (SCARB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
117888034 (SCARB1)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
117888034 (SCARB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117888034 (SCARB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117888034 (SCARB1)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Phagocytosis
Scavenger receptors
117888034 (SCARB1)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117888034 (SCARB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CD36
PorA
Motif
Other DBs
NCBI-GeneID:
117888034
NCBI-ProteinID:
XP_034646934
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Position
15:complement(9316631..9357034)
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AA seq
507 aa
AA seq
DB search
MAAPAGRRAPLALGLAGLVFALCGLVLLFVLPSMVRDQVIKNVRIDPNSIAFGMWKDVPV
PFYLSAYFFEVLNPKEIRLGAKPVVNQRGPYVYREYRYKTNITFHDNGTVSFLEYRRFFF
RPDLSDGMEEDYIVVPNILVMGAAIMMEKLPHFLKVLISGALAGLGQDAFMNRTVGEILW
GYDDPLIDVLNNFVPGLIPFKGKFGLFIDFNNSNTGLFTVYTGATDINQIHIVDTWNGLK
KVNYWRSNECNMINGTSGEMWPPFMTPSSSLEFYSPDACRSMKLVYEQSGVFKGVPTYRF
VAPKTLFANGTDYPPNEGFCPCRESGIQNVSTCRMNAPVFISHPHFYNADPVLVEAVDGL
HPNKEQHGLFLDVHPVTGIPMNCSIKLQLSLYIKKVSGISQTGQIKPVVLPILWFAESGA
IEGSVLKQFYTNLVLIPSVLEYVQYICIGLGVALIVAAIVLEVKRQRNAREKSPREPDPQ
TEPSLSSETTPLLQDASKTNRNDAAEA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcccgcggggcgcagagcccccctggcgctggggctggccgggctggtcttc
gccctgtgcggccttgtcctgctcttcgtcctgcccagcatggtccgggaccaggtcatc
aagaacgtgaggatcgatcccaatagcatcgccttcggcatgtggaaagacgttcctgtt
cctttttacctgtcagcctacttctttgaggtgctgaatccaaaagagattcgtctagga
gccaagccagtggtgaatcagcgtgggccctatgtttacagagaatacaggtataaaacc
aacataactttccatgacaatggtacagtttccttcctggaataccggagatttttcttc
cggccagacctgtctgatgggatggaagaggattacattgttgtgccaaacatccttgtg
atgggcgcagccattatgatggagaagctacctcactttttgaaggtgttaataagtggt
gccctggctggcttgggacaggacgctttcatgaaccgaactgtgggagagatcttgtgg
ggctatgacgacccgcttatagacgtgctgaacaattttgtgcccggtttgatccctttc
aaggggaagtttggcttatttatagattttaacaactcgaatacaggactgttcactgtg
tatactggggccacagacatcaatcagatccacatagtggatacatggaatggattaaaa
aaggtgaattactggcgctccaatgagtgtaacatgatcaatgggacttctggagagatg
tggcctcctttcatgaccccttcctcttctctagagttttatagtcctgatgcctgtcga
tccatgaagctagtgtatgagcagtctggagtatttaaaggggtgccgacctatcgcttt
gtggctccgaagactttatttgctaacggaacagattatccaccaaacgaaggcttctgc
ccctgcagggaatctggaatccagaatgtcagcacctgtagaatgaatgcaccagtgttc
atatcccacccacacttctacaatgctgaccctgtcttggtggaagctgtcgatggatta
catcccaataaggagcagcatgggctcttccttgacgttcatccggtcacgggaattcca
atgaactgctccatcaagctgcaactgagtctgtatataaagaaggtctctggcataagt
caaacaggacagatcaagccggttgtcttgcctatactttggtttgcagagagcggggcc
attgaaggttcagtcttaaagcagttctacaccaacctggtactgatcccatctgtgctg
gagtatgtgcaatatatctgcatcggtctgggtgtcgctttgattgttgctgccattgta
ctggaggtaaagagacagagaaacgcccgagagaagagcccacgagagccagacccacag
actgaaccatctttgtcttcagaaacaacaccactccttcaagacgctagtaaaacaaac
cggaacgatgctgctgaagcctga
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