Trachemys scripta elegans (red-eared slider): 117888065
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Entry
117888065 CDS
T07347
Symbol
TFIP11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tst03041
]
117888065 (TFIP11)
Spliceosome [BR:
tst03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
117888065 (TFIP11)
Other components
Complex C specific factors
117888065 (TFIP11)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
117888065
NCBI-ProteinID:
XP_034647006
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All DBs
Position
15:2144420..2154106
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AA seq
827 aa
AA seq
DB search
MSMSHLYGKDDDGDVEMEKFEITDWDLQNEFNPNRQRHWQTKEEATYGVWAEHDSDDERP
SFGGKRSRDYSAPVNFISAGLRKAAAEEVLEEDSDEDEKPIKQEEFPKEFVPKKLKTGGN
FKPSQKGFIGGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQR
KGKGALGAYGSERTSQSLQDFPVVDSEEEAEEEFQKELSQWRKDPNGGKKKPKYAYKTVE
ELKAKGRIGKQLTTPQKELSQVKVIDMTGREQRVYYSYSQISHKHNIPDDNPQQPLGKDS
KPQAFALPELEHNLQLLIDITEQEIIQNDRQLQYERDMVVNLTHEIQKMSEVLSHEETAI
SNLSKVLELVEECERRMQPNCDNPLTLDECAKIFETLQDKYYEEYRMSDRVDLAVAIVFP
LMKDYFKNWDPLKDCMYGTEIIAKWKRLLENDQLLSHSGQDLATDAFHRLMWEMWMPYVR
NIITQWQPRNCGPMVDFLDSWVHVIPVWILDNILDQLIFPKLQKEVENWNPLTDTVPIHS
WIHPWLPLMQSRLEPLYSPIRNKLANALQKWHPSDSSAKLILQPWKEVFTPGSWEAFMVK
NIVPKLGMCLNELVINPHQQHMDAFYWVIDWEGMVSVSSLVGLLEKHFFPKWLQVLCSWL
SNSPNYEEITKWYLGWKSMFSDQVLAHPSIKDKFNEALDIMNRAVSSNVGGYMQPGAREN
IAYLTHTERRKDFQYEAMQERREAENMAQRGIGMAASSVPMNFKDLIQTKAEEHNIVFMP
VIGKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcccatctctacggcaaagatgacgatggtgatgtggagatggagaaattt
gaaatcacggactgggacctgcagaacgagttcaaccccaaccgccagcgccactggcag
accaaggaggaggccacctatggcgtgtgggctgagcacgactcggacgacgagaggccc
agctttggaggcaaacgctctcgggactactcagcccccgttaatttcatcagtgcggga
ctaaggaaagctgcagctgaggaagtgctagaagaagactcagatgaggatgagaagccc
attaagcaggaagaattccctaaagagtttgtaccaaagaagttaaaaacaggtggcaat
ttcaaacccagccagaaaggatttataggagggaccaaatctttcatggacttcggcagc
tgggagagacacaccaagggaatagggcagaagcttcttcagaaaatgggttatgtccct
ggtagagggcttggaaagaatgctcaaggtatcatcaatccgattgaggccaagcaaagg
aaaggcaaaggagccttgggagcatatggctctgaacgaaccagtcagtccttgcaggac
ttccctgttgttgactccgaggaagaagctgaagaggaatttcagaaagagctcagtcag
tggaggaaggatcctaatggaggcaagaaaaaacccaaatatgcctacaagacagtagaa
gaattgaaggccaaaggcaggattggcaagcagctcacaactcctcaaaaggaactgtcc
caagttaaggttatagacatgactggccgggaacaaagggtttattacagttacagtcaa
atcagccataagcacaatatcccagatgacaatcctcagcagccactgggcaaagactcc
aagccccaagcatttgccttgccagaactggagcacaacttgcaacttctcatcgacatc
acagagcaggagatcatccagaatgaccggcagctgcagtacgagagagacatggttgtc
aacctgacccatgagatacagaagatgtctgaagtcctctcgcatgaggagacagcaatt
agcaacctcagcaaggtcctggaattggtggaggaatgcgagaggcgaatgcagccgaac
tgtgacaatccacttaccctggatgaatgtgcaaagatttttgagaccctccaagataag
tattatgaggaatacaggatgtccgatagagtggacctggcagtagctatcgtgtttcct
ctcatgaaagattacttcaagaactgggatcccctcaaggactgtatgtacggcacagaa
attatagccaagtggaaaaggcttttagaaaatgatcagttgttatcgcacagtgggcag
gacctagcaacggatgcttttcacaggcttatgtgggaaatgtggatgccctatgtaaga
aacataataacacagtggcagccgagaaactgtggaccaatggtagatttcttggacagc
tgggtgcatgttattcctgtttggatattggataatattctggatcagcttatcttcccc
aaactacagaaggaggttgaaaactggaaccctctgacagacactgtcccaatccactct
tggattcacccctggcttccactgatgcagtctcgattagagccattatattctccaatc
cgaaacaagttggcaaatgcactgcagaaatggcatcccagtgattcctcagccaaactg
atccttcagccctggaaagaagtgtttacaccaggatcttgggaagctttcatggtcaaa
aacattgtgcctaaactcgggatgtgtctcaatgagctcgtcattaaccctcaccagcag
catatggatgcattttactgggtgatcgactgggaggggatggtctctgtgtccagcctt
gttggacttctggagaaacacttcttccccaaatggctgcaggtgctgtgctcctggcta
agtaatagccccaattatgaagagatcaccaagtggtaccttggttggaagtctatgttc
tctgaccaggtgttagcacatccatcgattaaggacaaatttaatgaagctcttgatatc
atgaaccgggctgtctcttccaatgtcggtggctacatgcaaccaggtgctcgggaaaac
attgcctatctcactcacaccgagcggaggaaagacttccagtatgaagctatgcaggag
cggcgagaggctgagaacatggcccaacggggcataggcatggctgctagctctgtgcca
atgaattttaaggacctcattcaaacaaaagcagaagaacacaatatcgtcttcatgcct
gtgatcgggaagcggcatgaaggaaaacaattgtacacatttggacgaattgtgatttac
attgacaggggcgtcgtgtttgtacaaggagaaaagacatgggtgccaacctctcttcag
agtctcattgatatggctaaataa
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