Trachemys scripta elegans (red-eared slider): 117888126
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Entry
117888126 CDS
T07347
Symbol
SMPD4
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00600
Sphingolipid metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
117888126 (SMPD4)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
117888126 (SMPD4)
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Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Motif
Other DBs
NCBI-GeneID:
117888126
NCBI-ProteinID:
XP_034647154
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All DBs
Position
15:complement(20049603..20075369)
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AA seq
827 aa
AA seq
DB search
MAVPHLQQPSFLLASLKADCMNKPFAQRCHDLEIVIEDFPAKELHAIFPWLVENIFGSLD
GIIIGWNLRCLHGRANPTEYAIALDFLDPSGPMMKLVYKLQAEEYRYEFPVSYLPGPVKA
SMQERVLPECSLYHNKVQFPPSGGVGSNLALNPFEYYMFYFAISLITQRNSPTTHHVSPS
NSAYFSLVDTYLKWFLPTEGSVLPPPSSNPGGGIPSPAPRSPAVPFTSYGIHHTSLLKRH
IAHQPSVNADPASQEIWRSETVLKVFVEMWLHHYSLEMYQKMQSPHVKLEVLHYRLSISS
THHSSPAQSGYQALHAYQESFKPTEEHVLVIRLLVKHLHAFANSLKPEPLSPSAHSHTAS
PLEEFKRVVIPRFVQQKLYIFLQHCFGHWPLDASFRAVLEMWLSYVQPWRYAPEKPLQSA
EPQPRSVSEKWAPFIQENLLMYTKLFVGFLNRALRTDLVSAKNALMVFRVAKVFAQPNLA
EMIQKGEQLFLEPELVIPHRQHRIFMTPTLGGSFLSSWPPAITDASFKVKSHVYCLEGQE
FQYKQMFGPEVRNLVLRLAQLIGQAQQTAKSISDHSAETMASQSFLSWFRFSPSDMNGSY
TGNDLDEIGQDSIKKTDEYLEKAQEYLCQIFRLNEAQLTQMIMNCGAAQDENGKKQLPDC
IESEDGLILTPLGRYQIINGLRRFEIEYQGDTDLQPIRSYENATLVRLLFQLSSAINQRF
ADQMEILCSREDFIGRLCRYHLTNPFLAEKGRHSPALKQRSGRSRRPRISLRFLASYRTL
LSLFMIYFIASWFCIGPLACTFIILLGYLLYAIVMTFFTERWKPHQH
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccctcacttacaacagcctagcttcctattggccagtttgaaggcagattgc
atgaacaagccctttgctcagaggtgccatgatctggagatagtcattgaagattttcct
gccaaggaactgcatgccatcttcccatggctagtggagaatatttttggtagtctggat
ggcataatcataggttggaatcttcgctgtttgcacggaagagcgaatcctacagagtat
gctattgccctggatttcctggatcccagtggcccgatgatgaagctggtttacaaactc
caagctgaggagtacagatatgaattcccagtctcctatcttccaggccccgtgaaagct
tccatgcaagagcgagtcctaccagaatgctcactataccacaacaaagtccagttccct
ccatctggaggcgtaggttccaacttggccctcaatccatttgaatattacatgttttac
tttgcaataagccttatcacacagaggaactctcccaccacccatcatgtcagcccttca
aacagcgcttacttcagtctggtggacacatacctgaaatggtttcttcccacagaagga
agtgttcttcctccaccttcttccaatcctggggggggcatcccttcacctgctcctaga
tccccagcagtacctttcacttcttatggcatacatcacactagtctgctgaaacggcac
attgcccatcagccttcagtgaatgctgatcctgcttcccaagagatctggagatcagaa
acagtgcttaaagtttttgttgaaatgtggcttcaccattactcactggaaatgtatcag
aaaatgcagtcccctcatgtgaagctggaggttctccactaccgactcagtatctccagt
acacaccacagtagtcctgcccaatccggctaccaggccctccacgcataccaagaatca
tttaaacccacagaagagcatgtgttagtgataagactgctcgtgaagcatctgcacgct
tttgccaacagcctgaaaccagagccactctcgccctcagcccattcccatacagcgagc
ccactggaggaattcaagagagttgtgattcctcggtttgtccagcagaagctctatatc
ttcctgcagcattgctttggccactggcctctggatgcctctttcagagctgtcctggag
atgtggttaagctacgtgcagccctggagatatgcgcctgagaaaccacttcagagtgca
gagcctcagcctcgcagtgtatcagagaaatgggctcccttcattcaagagaacctactg
atgtacaccaagctatttgtaggctttctgaaccgagctctccgcaccgatttggtcagc
gctaaaaatgccctgatggtgttccgagtagccaaggtctttgctcagcccaacctagct
gaaatgatccagaaaggagagcagttattcctggagccagaacttgttatccctcaccgt
caacaccgaattttcatgacccccactcttggtgggagcttcttgtcatcatggcctcca
gcaatcacagatgcctcatttaaggtgaagagtcatgtttactgcctggaaggacaggag
ttccagtacaagcagatgtttggtccagaagtcaggaatttggtattaagattggcccag
ttaataggccaggcccagcaaacagcaaaatccatatcagaccactctgcagagaccatg
gctagtcagtccttcctatcctggtttaggttcagcccttctgacatgaatggttcctat
acaggaaatgacctagatgaaattgggcaagacagcatcaagaaaacagatgaatatttg
gagaaggcacaggagtacctatgccagatctttcggttgaatgaagcccagctgacccaa
atgattatgaattgtggagcagctcaggatgagaatggaaagaagcaacttccagactgc
attgagagtgaggatggactaattcttacgcctcttggcaggtatcagatcataaatggc
ttacggcggtttgagatagagtaccaaggagatactgatcttcagcctattagaagttat
gaaaatgccactctagtgcgactgttgttccagttatcctcagcaattaatcaaaggttt
gctgatcaaatggagattctctgctcgagggaagactttattggcaggttgtgtcgctat
catcttaccaacccattccttgcagagaagggcaggcacagcccagcactgaaacaaagg
tcaggacgttctcggcgaccaaggatcagtctgagatttctggctagctacaggactctt
ctttctttgttcatgatatacttcattgcatcttggttctgcattggaccactggcctgc
acattcattattctccttgggtatcttctttatgcaatagtaatgactttcttcactgaa
aggtggaaacctcatcaacactaa
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