KEGG   Trachemys scripta elegans (red-eared slider): 117888149
Entry
117888149         CDS       T07347                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tst03019]
    117888149 (ATXN2)
Messenger RNA biogenesis [BR:tst03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117888149 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 117888149
NCBI-ProteinID: XP_034647193
LinkDB
Position
15:5542747..5611007
AA seq 1054 aa
MRMVHILTSVVGSKCEVQVKNGGVYEGVFKTYSPKCDLVLDAAHRKPAESSLGPKREDIL
ESILFKSSDFVMVQFKDMDTNYARRVPSETDAFTDSAIGVKVNGEHKEKDLEPWDGGETT
TTEDLEALETDVSNGWDPNDMFRYNEENYGIVSTYDSSLSSYTVPLERDNSEEFLKREAR
AAQLAEEIESSAQYKARVALENDDRTEEEKYTAVQRNSSEREGHGVNTRESKYVPTGQRN
RDVLSWGGGRQNSPRMGQSGSGPSISRSGSHTSDFSPNSGADQRVVNGGVPWPSPCPSPS
SRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPSHPSAHGSPAPVSTMPKRMSAEGP
PRMSPKAQRHPRGHRVSTGRGTISSGLEFVSHNAPGEASTSTVARGSPSGGTWSSVVSGV
PRLSPKTHRPRSPRQSSVGSTPAGPALSSPQAGTIPTESVAMPVPAASPTPASPASNRAV
TPSSEAKDSRLQDQRQNSAAGNKENAKPSEISPSFPKSENKGVSSAASEHRKQIDDLKKF
KNDFRLQPSSTPETVDQLLNKNREGEKSRDVIKEKTESNSKESVIETSSNANSNSGSSKS
NSPSISPSTSSSSEQKRGPEVTSQGVQTSGPGSKQDKEDKEEKKDTSEQVRKSTLNPNAK
EFNPRSFAQPKPSTTPTSPRPQAQPSPSMVGHQQPTPVYTQPVCFAPNMMYPVPVSPGVQ
PLYPIPMTPMPVNQAKTYRAVPNMPQQRQDQHHQSTMMHPASAAGPPIVATPPAYSTQYV
TYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNTRMMAPPTHAQPGLVSSSATQYGAHE
QTHAMYACPKIPYSKETGPSFYFAISTGSLAQQYAHPNATLHPHPPHPQPSATPTGQQQS
QHAGSHPAPSPVQHHQHQAAQALHLANPQQQSAMYHAGLAPTPPSMTPGSNTQSPQNSFP
TAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQA
AIAQSALQPIPVSTTTHFPYMTHPSVQAHHQQQL
NT seq 3165 nt   +upstreamnt  +downstreamnt
atgagaatggttcacatacttacatcagttgttggatccaaatgtgaagtacaagtgaaa
aacggaggtgtatatgaaggagtttttaaaacctacagtcctaagtgtgatttagtgctt
gatgctgctcatcgaaaacctgcagaatccagtctggggccaaaacgggaagacatatta
gagagtatcttgttcaagtcttcagattttgttatggtgcagtttaaagatatggacacc
aattatgcaaggagagttccttcagaaacagatgcttttactgattcagccattggtgtt
aaagtaaatggtgaacacaaagaaaaggaccttgaaccatgggatgggggtgagaccact
accactgaggatcttgaggctttagagacagatgtttctaatggatgggatcctaatgac
atgtttcgttacaatgaagaaaattatggcatagtatcaacttatgacagcagtttatct
tcgtatacggtgcccttagagagggataattcagaagaatttttaaaacgggaagcaaga
gcagctcagttagcagaagaaattgaatcaagtgcccagtacaaagctcgggttgccttg
gaaaacgatgaccggacagaagaagaaaaatatactgctgttcagagaaattcaagtgaa
cgagaaggacatggtgtgaacactagggaaagcaagtatgttccaactggacaacgaaat
agagatgttctgtcctggggaggaggcagacaaaattcaccaaggatgggccagtctgga
tcgggcccctcaatttcaagatctggatcccatacttcagactttagtcctaattctgga
gcagaccaaagagtagttaatggaggtgttccctggccatcgccttgcccatctccttcc
tctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgggcagccacc
cctacaaggccgccctccaggcccccctcgcggccgtccaggcccccgtctcacccctct
gctcatggttctccagctcctgtctctactatgcctaaacgcatgtctgcagaagggcca
ccacggatgtctcctaaggcacaacggcaccctcgaggtcacagagtctctactggtagg
ggtacaatttcaagtggcttagaatttgtatctcataatgcaccaggggaagcatctact
tctacagtggcacgaggcagcccatcaggtgggacgtggtcatcagttgtcagtggggtt
ccaagattatcccctaaaacacacaggcctaggtcgccaagacagagcagtgttggaagt
actccagctgggccagctctgtcctctccgcaagctggtactattcctactgaatcagtt
gccatgcctgtcccagctgcatctcctactcctgccagtcctgcatccaatagagcagtt
accccatccagtgaagccaaagattccaggcttcaggaccagaggcagaattctgcagct
ggaaacaaggaaaatgctaagccaagtgagatttctcctagctttcctaaatctgaaaac
aaaggtgtatcttcagctgcttcagaacacagaaaacagattgatgatttaaagaaattt
aagaatgactttaggttacagccaagttccaccccagagactgtggatcaactgctaaac
aaaaatcgagaaggtgaaaaatccagagatgtgattaaagagaaaacagaatcaaactct
aaagaatctgtcattgaaaccagcagtaatgcgaactctaacagtggcagtagcaaatcg
aatagtcccagtatttctccatcaactagtagtagctctgagcagaagcgagggccagag
gtaacctctcagggtgtacagacatctggacctggaagtaaacaagataaagaggataaa
gaagagaagaaagatacctctgagcaagttaggaaatcaacacttaatcccaatgcaaag
gagttcaaccctcgatcttttgctcaacccaagccttctactacaccaacctcacctcgt
ccacaagctcagcctagcccttctatggtgggtcatcaacagccaactcctgtgtatact
cagcctgtttgttttgcaccaaatatgatgtacccggtcccagtgagcccaggcgtgcag
cctttgtatcctattcccatgactcccatgccagtgaaccaagccaagacctatagagca
gtaccaaatatgccacaacaacgccaagaccagcatcatcagagcaccatgatgcatcct
gcctcagccgcaggcccccctattgtagctacaccaccagcctattcaacacaatatgtt
acctatagtcctcaacagttccctaatcagcctcttgtgcaacatgtgccacattatcag
tctcagcatcctcatgtttatagccctgtaatacagggtaacactagaatgatggcacca
ccaacacatgcacagcctggtttagtatcttcttcagcaacacagtatggtgcgcatgag
cagacgcatgctatgtatgcatgtcccaaaataccatacagcaaggagacaggtccttct
ttctactttgccatttctactggttcacttgctcagcaatatgcccacccgaatgctacc
ctgcatccacaccctcctcatccgcagccttctgctacgccaacaggacagcagcaaagt
caacatgctggaagccaccctgctcccagtccagtgcagcatcaccagcaccaggctgct
caggcactccacctggcaaacccacagcagcagtcagcaatgtaccatgctggtcttgct
ccaacccccccttccatgacaccaggctccaatacgcagtctccacaaaatagttttcca
acagcacaacaaacagtcttcactattcatccttcccatgttcagcctgcatataccaat
ccgccacacatggcccatgtaccccaggctcatgtacagtcaggaatggttccttctcac
ccaactgcccatgctccaatgatgctaatgacgacacagccacctggtggtccccaagcc
gccatcgctcaaagtgcactacagcccattccagtctcgacaacaacacatttcccctat
atgacgcacccttcagtacaagcccaccaccaacagcagttgtaa

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