Trachemys scripta elegans (red-eared slider): 117888162
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Entry
117888162 CDS
T07347
Symbol
CLDN5
Name
(RefSeq) claudin-5
KO
K06087
claudin
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03272
Virion - Hepatitis viruses
tst04382
Cornified envelope formation
tst04514
Cell adhesion molecule (CAM) interaction
tst04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117888162 (CLDN5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117888162 (CLDN5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117888162 (CLDN5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117888162 (CLDN5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tst03037
]
117888162 (CLDN5)
04147 Exosome [BR:
tst04147
]
117888162 (CLDN5)
Cilium and associated proteins [BR:
tst03037
]
Other cilia and associated proteins
Stereociliary proteins
117888162 (CLDN5)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
117888162 (CLDN5)
Exosomal proteins of colorectal cancer cells
117888162 (CLDN5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
T4SS_CagC
DUF308
TMEM37
DUF4064
Motif
Other DBs
NCBI-GeneID:
117888162
NCBI-ProteinID:
XP_034647231
LinkDB
All DBs
Position
15:17316303..17320238
Genome browser
AA seq
218 aa
AA seq
DB search
MTSAAREILGLGLCVLGWVGVILVCGLPMWQVSAFTDGHIVVAQTTWEGLWMNCAVQSTG
QMQCKVYDSILALDPHMQTGRALTVLVTLLGLVALMVTVVGAQCTTCVRAGKTKSWIVMT
GGVLYILCGVLVLIPVSWFANIIISGFYDPKVPNSMKREMGAALYIGWAATALLLLGGSL
ICCSCSCPGEGENAFPVKYSASTRRPTSNGEYDKKNYV
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggcagcgcgggagatcctgggcctggggctgtgcgtcctgggctgggtgggg
gtcatcctggtctgcggtttgcccatgtggcaggtgtccgccttcaccgacggccacatc
gtggtggcgcagaccacctgggaagggctgtggatgaactgcgcggtgcagagcaccggg
cagatgcagtgcaaagtctacgactccatcctggcgctggatccccacatgcagacgggc
cgggcgctcaccgtcctggtgaccctgctggggctggtggcgctgatggtgaccgtggtg
ggggcccagtgcaccacctgcgtccgagccggcaagaccaagtcctggatcgtgatgacc
ggcggggtcctctacatcctctgcggggtgctggtcctcatccccgtctcctggttcgcc
aacatcatcatcagcggcttctacgaccccaaagtgcccaactccatgaagcgggagatg
ggggccgccctctacatcggctgggcggccacggctctgctgctcctcgggggcagcctg
atttgctgctcctgctcctgccccggcgagggcgagaacgccttccccgtcaagtactcg
gcctccacccggcggcccacctccaacggggagtacgacaagaagaactacgtctga
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integrated database retrieval system
