Trachemys scripta elegans (red-eared slider): 117888185
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Entry
117888185 CDS
T07347
Symbol
XBP1
Name
(RefSeq) LOW QUALITY PROTEIN: X-box-binding protein 1
KO
K09027
X box-binding protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117888185 (XBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117888185 (XBP1)
04131 Membrane trafficking [BR:
tst04131
]
117888185 (XBP1)
Transcription factors [BR:
tst03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
AP-1(-like) components, Jun
117888185 (XBP1)
Membrane trafficking [BR:
tst04131
]
Autophagy
ER-phagy
ER stress-related proteins
117888185 (XBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
bZIP_Maf
Motif
Other DBs
NCBI-GeneID:
117888185
NCBI-ProteinID:
XP_034647286
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All DBs
Position
15:340611..345567
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AA seq
426 aa
AA seq
DB search
MGLSHGGRRRVERGGAQRSAGGTLAAPGSQQQQQRSSPASAMVALHGSAAPRLLLIPGQA
AEPLGAAASRPLSVVLPAGGPRSPSPELQQPARKRQRLTHLSPEEKALRRKLKNRVAAQS
ARDRKKARMSELEQQVLELEQENQNLLLENQLLREKTHGLAVQNQELRCRLGLDALEMEE
EEKREPKVVMESQVDEIRMVTGSAERSTQTTCSSAAGAGPAVTPPDNLHMDSDGIDSSDS
ESDLLLGILDSLDPDMFLRYGNSESCLEELEEEICGKESDSLPASPTPSVGSSSAKLEAI
NELIRFDHVYTKPLIFEIPAKMGSQADMLMKMEEASLSPSEDKDLPESPVSVKDEPIDNF
LPELGISNLLSSDHSLETSCCLLDACSDSGYEGSPSPFSDLPSPLSTVHSWEDTFANELF
PQLISV
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggggctaagccacggtggcagaaggcgagtggaacgcggcggagcccagcgttcggcc
ggtggaacgttggcagcgccgggctctcagcagcagcagcagcgaagcagccccgcgtct
gccatggtggcgctgcacggttccgccgccccgcggctgctcctcatccccggccaagca
gccgagcccctgggcgccgcagccagccggcccctctccgtggtgctcccggccgggggc
ccgcgctcccccagcccggagctccagcagcctgcccgcaagcggcagcgactcacccac
ctgagtccggaggagaaggcgctgcgcaggaagctgaagaaccgcgtggcggcgcagagc
gcccgggacaggaagaaggcgcggatgagcgagctggagcagcaggtgttggagctggag
caggagaaccagaatctcctgctagaaaaccagctcctgcgggagaagacccacggcctc
gcagtgcagaaccaggagctgcgctgccggctggggctagatgcgctggagatggaggag
gaggagaagagggagcctaaggtggtgatggaatcacaggtggatgaaatcaggatggtg
accgggtccgctgagcgcagcactcagactacgtgttcctctgcagcaggtgcaggccca
gcagtcacccctcctgacaatctccacatggattctgatggcattgactcttcagactct
gagtctgatctgctattgggcattctggacagcctggacccagacatgttcctccggtat
ggtaattcagagtcgtgcttggaagagcttgaggaagaaatctgtggaaaagaatcagat
tccttaccagcctcccccactccctctgtggggtcctcatcagccaagttggaggccatt
aatgaactgatccggtttgaccacgtgtacaccaagcccctaatctttgagattccagct
aaaatgggcagccaagctgatatgctaatgaaaatggaggaagcatctctctctccctca
gaagacaaggacctccctgagtccccagtctcagtgaaagacgaacctatagacaacttt
ttgcctgagctgggtatctcaaacctgctctcatctgatcacagccttgagacctcttgc
tgtctgttggatgcatgtagtgactctggatatgaaggatccccttctcccttcagtgat
ctgccctctccactgagcacagtccattcttgggaagatacttttgccaatgaactcttt
ccccagttgatcagtgtctga
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