Trachemys scripta elegans (red-eared slider): 117888193
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Entry
117888193 CDS
T07347
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03030
DNA replication
tst03410
Base excision repair
tst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
117888193 (POLE)
03410 Base excision repair
117888193 (POLE)
03420 Nucleotide excision repair
117888193 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tst03032
]
117888193 (POLE)
03400 DNA repair and recombination proteins [BR:
tst03400
]
117888193 (POLE)
Enzymes [BR:
tst01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
117888193 (POLE)
DNA replication proteins [BR:
tst03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
117888193 (POLE)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
117888193 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
117888193
NCBI-ProteinID:
XP_034647306
LinkDB
All DBs
Position
15:28401236..28437466
Genome browser
AA seq
2284 aa
AA seq
DB search
MVLRNSGRRRAEPAGGDPDTPRDDGSGLSALKRLERSQRTDRLDAQFGFERAKEPGEKTG
WLINMHPTEILDDDKRLVSCVDYYFIQEDGSRFKVALPYKPYFYIATRKGCEREVSSFLS
KKYQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRREISPAVKKNRERD
QASDTYTSMLSSALIGGSLTMDDEGPSKKTVNQMDNIVDMREYDVPYHIRLSIDLKIHVA
HWYNVRYRGSIYPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGYLVTNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTIMVT
YNGDFFDWPFVETRAAVHGLNMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPVAFDFLLQRVEKTLRHAIEEEEGLPLDQVTNFQEVCD
EIKVKLNSLKDIPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
NCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKLPPLYPDGPPRAFHELSREEQAKFEKK
RLADYCRKAYKKLHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSA
ATEMGDATEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNILV
KEGFTNDQYQELVDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIIS
KKPEGSPVTERAIPLAIFQAELTVRKHYLRKWLKSPSLQDFNIRTILDWDYYIERLGSTI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVTANQPQ
EGTPCTQVADMEDFGAAKPLQPSVPVASKRKRVPVAGESQEMSQNLELTQSWREILGPPP
PTGTTKEERLAWLQYHKKKWELQARQRQARRKKRRLEDGEVVLGGGVIRDGPSKGLSSYL
RRTARSILDLPWQIVQVAETSQPGLFRLWAVIGSDLHCIKLSIPRIFYVNQRVAKPEEGP
AYRKVNRVLPRSNLLYNLYEYSVPEDMYQEHINEINAGLSAPDIEGVYETQVPLLLRALI
HLGCVCMVSRQLVRHLTGREAETFALEHLEMRSLAQFSYLEPGSIRHIYLYHNAQGSKAL
FGLFIPSQRKASVFVLDTVRSNQMPNLANLYSSERSAMLEKVGEELLPPDKHTFEVRAET
DIKTVSRAIQRLLLGYKDERRGPTLIAVQSNWDVKRLASGIPVFEEFPLVPVRVTDDISY
AVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHLRR
HNHLLWLSPTARPDLGGKEADDNRLVMEFDDRASVEINNPGCYSTVCLELDIQSLAVNTI
LQSHHINDMEGASSMSISFDVIQQASLEDMVTGNQAASIPASYDETALCSNTFRILKSMV
VGWVKEITQYHNVYADNQVIHFYRWLRSPASLLHDPALHRTLHNMMKKLFLQLVAEFKRL
GSSVVYANFNRIILCTKKRRIEDAIAYVEYITNSIHSKEIFHSLTISFSRCWEFLLWMDP
ANYGGIKGRVPTSVPSGETDPSKWQAGAEEGSEEEEEEAEEEEEPGEASVEDLLENNWNI
VQYLPQAASCQNYFLMIVSAYIVAVYHSMKEEMRRSAPGSTPIRRRASSQASQEAVGEAG
AMPGVITFSQDYVSNELTQSFFTITQKIQKKVTGSRHATLPSDMFPALPGSYLPLNNPAL
EFIKYVCKVLSLDANITNQVNKLKRDLLRLVDVGEFSEEAQFRDPCRSYVLSEVICRNCN
FCRDLDLCKDPSPCQDGAVPPSWVCSNCQAEYERGSIEAALVEALQKKLMAFTLQDLVCV
KCKGVKETHMPIYCACAGDFTLLIQTKAFVEQINVFRSIAQHYSMAHLLETIEWLLQLNP
QLRC
NT seq
6855 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaggaacagcgggcggcgccgcgccgagcccgcgggcggggaccccgatacc
ccccgggacgatggctccgggctctccgccctcaagcgcctggagcgcagccagcggacc
gaccggctggacgcgcagttcgggttcgagcgggccaaggagccgggggagaagacgggc
tggctgatcaacatgcacccgacagagattttggacgatgacaaacgcttggtcagctgc
gtggattattacttcatccaggaggatgggagcaggtttaaggtggccctgccctataaa
ccctacttctatattgcaacccggaagggctgcgagcgggaagtgtcctccttcctctcc
aagaagtaccaggggaaaatcgccaagctggaaacggttcccaaagaggatttggacttg
ccaaatcacctggtgggcctgaagcggaactacatcaagctatctttcaacactgtggat
gacctggtgaaggtgcggcgggaaatctctcctgctgtgaagaagaacagggagcgggac
caggcgagcgacacctacacgtccatgctgtccagtgctctgatcggtggcagcctgacc
atggatgatgaggggccctcaaagaagactgtcaaccagatggacaacatagttgacatg
cgggagtacgacgtgccgtaccacatccgcctgtccatcgacctgaagattcatgtggct
cattggtacaatgtccgctatcggggcagcatctaccctccggaaatcacccgccgagac
gacctggtggagcgaccggatcctgttgtgctggcctttgacattgaaaccaccaagctc
cccctgaagttccctgatgcagagacagaccagatcatgatgatctcctacatgattgat
ggccagggctacctggtcacaaacagggagatcgtctctgaggatattgaagattttgag
tttactcccaagccggagtacgagggtcccttttgcgtctttaacgagccggatgaggcc
catttaatccagaggtggtttgaacatgtccaggagaccaaacccaccatcatggtcact
tacaatggggacttctttgactggccctttgtggaaaccagagccgcagtgcatggactg
aatatgtaccaagagattggattccaaaaggacagccaaggggagtacaaagcctcccag
tgcatccacatggactgtctaaggtgggtgaagagagacagttacctccccgtgggaagc
cacaacctgaaagcagcagccaaagcgaagctgggttacgacccggtggagctggacccc
gaagagatgtgccggatggctacagaagagcctcagacgctggccacttactcggtgtct
gacgctgttgctacctactacatgtacatgaagtacgtgcacccgttcatcttcgccctg
tgcaccatcatccccatggagcccgacgaggtgctgcggaaaggctcagggacgctgtgc
gaggcgctgctcatggtccaggcctatcacgccaacatcatcttccccaacaagcaggag
caggagttcaacaaactcactgaggatgggcatgtgctagactcggagacctacgtcggg
ggccatgtggaggcactagagtcgggggtcttccgcagcgacatcccctgccgctttaaa
atgaaccctgttgccttcgacttcctgctgcagcgcgtggagaagaccctgcggcatgcc
atcgaggaagaggagggtttgcccctggatcaagtcaccaacttccaggaggtgtgtgat
gaaatcaaagtcaagctgaactccctgaaggacattccgaaccggatcgagtgtcccctc
atctaccatctggacgtgggggccatgtaccccaatatcatccttacaaacaggctgcag
ccctcagcgatggtggacgaggccacgtgcgctgcctgtgactttaacaagccaggtgcc
aattgccagcgccggatgacctggcagtggagaggggaattcatgcccgcgagccgcagc
gagtaccaccgcatccagcagcagctggagtcagagaagctgcccccgctctacccggac
ggcccgccccgtgcttttcacgagctgtcccgtgaggaacaggccaagtttgagaagaag
cgactggcggattactgccgcaaggcctataagaagctgcatgtcaccaaggtggaggag
cgcgtcaccaccatctgccagcgggagaactcgttctacgtggacaccgtgcgagccttc
agagaccgtcgctacgagttcaagggcctgcacaaggtgtggaagaagaagctgtctgcc
gccacggagatgggagacgccactgaagtgaaacgctgcaagaacatggagatcctgtat
gactccttgcagctggcacataagtgtatcctcaactccttctacggctatgtgatgcgc
aaaggggcccgctggtactccatggagatggccgggattgtctgcttcactggagcaaac
atcatcacccaggccagggagctgatcgagcagattgggaggccgctggagctggacacg
gacggaatctggtgcgtccttcccaacagcttcccagaaaactttgtcatcaaatcgacc
aatgcgaagaagcccaaggtgacaatctcctatcccggtgccatgctgaacatcctggtg
aaggaaggcttcacgaatgatcagtaccaggagctcgtggacccagcttcgctcacctac
gttacccgctcagagaacagcatcttctttgaagtagacgggccatacctggccatgatc
ctcccagcctccaaggaggagggcaagaaactgaagaaacggtacgcggtgttcaatgag
gacgggtccctggctgagttgaaggggtttgaagtgaagcggcgtggggagctgcagctg
gttaagatcttccagtcgtccgtgttcgaggccttcctgaagggcaccacgctggaggag
gtctacgcctccgtggccaaggtggccgactactggctcgatgtgctttacagcaaggct
gccaacatgccggactcggagttatttgagctgatttccgagaaccgctccatgtcccgc
aagctggaggattacggggagcagaaatccacctccatcagcacggccaagcgcctggcc
gagttcctgggggatcagatggtgaaggacgctgggctgagctgccgattcatcatctcc
aagaaaccggaagggtccccggttaccgagagggccatcccgctggccatcttccaagcc
gagctcaccgtgcggaagcactacctccggaaatggctgaagagcccctccctgcaggac
ttcaacatccggacgatcctggactgggactactacatcgagagactcggcagcaccatc
cagaagatcatcaccatccctgcggcactgcagcaggtgaagaaccccgtgccccgcgtc
cgacaccccgactggctgcacaagaagctcctggagaagaacgacgtgtacaagcagaag
aaaatcaacgagctgttcactagtgaaggcaagagacaggtgaccgccaaccagccccag
gagggcaccccctgcacacaggttgccgacatggaggattttggggctgcgaagcccctg
cagccgtcggttcctgtcgccagtaagcgcaagcgggtcccggtggcaggggagagccag
gagatgtctcagaacctggagctgacccagtcctggcgggagatcctgggcccgccccca
cccactggcaccaccaaggaggagcgcctggcctggctccagtaccacaagaagaagtgg
gagctgcaggcgcggcagcgccaggcccgccggaagaagcggcggctggaggatggcgag
gtggtgctgggcgggggcgtgatccgggatgggccctccaaggggctcagcagctatctg
cgcaggacagcccgcagcatcctggacctgccctggcagatcgtgcaggttgctgagacc
agccagccgggcctgttcaggctgtgggccgtcatcgggagcgacctgcactgcatcaag
ctgagcatcccgcgcatcttctacgtcaaccagcgggtggccaagccagaggagggaccc
gcctaccggaaggtgaacagggttctgccccgctcgaatctcctctacaacctgtacgag
tactccgtccccgaggacatgtatcaagagcacatcaacgagatcaacgccggtctgtct
gccccagacatcgagggagtgtacgagactcaggtgccgttactgctgcgcgccttgatc
cacctgggctgtgtgtgcatggtcagcaggcagctggtcaggcacctcaccggccgcgag
gctgaaacctttgccctggagcacctggagatgcgctcgctggcccagttcagctacctg
gagccagggagcatccggcacatctatctctatcacaacgcccagggcagcaaggcgctc
ttcggcctcttcatcccatcgcagcgcaaggcctctgtcttcgtgctggacacggtgcgc
agtaaccagatgccaaacctcgccaacctgtactcgtcggagcgcagtgccatgctggag
aaggtgggcgaggagctgctccctccggacaagcacaccttcgaggtgcgagccgagacc
gacatcaagacggtttccagggccatccagcgcctgctgctgggctacaaggacgagcgc
aggggccccacgctgatcgctgtgcagtccaactgggacgtgaagcggctggcgagcggg
attcccgtcttcgaagagttccccttggttcccgtgcgggtgacagatgacatcagctat
gccgtcctggactggcagcgccatgctgcccgccgcatgatccgccactacctcaacctc
gacacctgcctgtcacaggcctttgagatgagcaggtactatcacatccccattgggaac
ctccctgacgacatctccaccttcggctccgacctcttcttctcccgccacctgcgtcgc
cacaaccacttgctgtggctctcgcccacggcccgcccggacctcgggggcaaggaggca
gatgacaaccggctggtcatggagttcgacgacagagcctcagtggagatcaacaatccg
ggctgctattccaccgtgtgcctggagctggacatccagagcctggctgtgaacaccatc
ctgcagtcccaccacatcaacgacatggagggagcctccagcatgagcatcagcttcgac
gtgatccagcaggcgtctctcgaggacatggtgacggggaaccaggccgccagcatcccg
gccagctacgacgagaccgccctctgctccaacacgttcaggatcctgaagagcatggtg
gtgggctgggtgaaggagatcacgcagtaccacaacgtctatgccgacaaccaggtgatc
cacttctaccgctggctccgctcgccggcctcgctgctgcacgacccggcgctgcaccgc
accctgcacaacatgatgaagaagctcttcctgcagctggtggcagagttcaagcgactc
ggctcttccgtggtttacgccaacttcaaccgcatcatcctgtgcaccaagaaacggcgc
atcgaggacgccattgcctacgtggagtacatcaccaacagcatccactcgaaggagatc
ttccactccctgaccatctccttctcccgctgctgggagttcctgctctggatggaccca
gctaactacgggggcatcaaggggagagtgcccaccagcgtcccctctggggagacggac
cccagcaaatggcaagcgggtgctgaggagggcagtgaggaggaggaagaggaggctgag
gaggaggaagagccgggggaggccagtgtggaggatttgctggagaacaactggaacatt
gtgcagtacctgccccaggcagcctcctgccagaactacttcctcatgatcgtgtcagcc
tacatcgtcgccgtgtaccacagcatgaaggaggagatgcggcgcagcgcccccgggagc
acgcccatcaggaggcgggccagcagccaggcctcccaggaggctgtgggcgaggcgggc
gccatgcctggcgtgatcaccttctcacaggactatgtctccaacgagctcacccagagc
tttttcaccatcactcagaagatccagaagaaggtgactggctcccgccatgccacgctg
ccctcggacatgttcccagcgctgcccggctcctacctgccgctcaacaacccggcactg
gagttcatcaaatacgtctgtaaggtgctgtcgctggatgccaacataaccaatcaagtg
aataagctgaagcgggacctgctgcgcctggtggacgtgggtgagttctcggaggaggcc
cagttccgggacccctgccgctcatacgtgctctccgaggtgatctgccgcaactgcaac
ttctgcagggacctggacctctgcaaagaccccagcccctgccaggatggcgctgtgccc
cccagctgggtgtgctccaactgccaggcggagtatgagcgcggctccatcgaagcggcc
ctggtggaagccctgcagaagaagctgatggccttcacgctgcaggacctggtgtgcgtg
aagtgcaaaggcgtgaaggagacacacatgcccatctactgcgcctgcgctggagacttt
accctactgatccagaccaaggccttcgtggagcagatcaacgtcttccgcagcattgcc
cagcactacagcatggcccacctgctcgagaccattgagtggctgctgcagctgaacccg
cagctccggtgctga
DBGET
integrated database retrieval system
