Trachemys scripta elegans (red-eared slider): 117888276
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Entry
117888276 CDS
T07347
Symbol
DTX1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117888276 (DTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117888276 (DTX1)
Enzymes [BR:
tst01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117888276 (DTX1)
Ubiquitin system [BR:
tst04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117888276 (DTX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
zf-C3HC4
zf-rbx1
WWE_5
zf-RING_Vps41
zf-RING_2
zf-ANAPC11
zf-RING_5
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
117888276
NCBI-ProteinID:
XP_034647430
LinkDB
All DBs
Position
15:complement(29708801..29829998)
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AA seq
620 aa
AA seq
DB search
MLRPSSGVLISVNGLGFPPQNLARVVVWEWLNEHGRWRPYTAAVCHHIENVLKEDARGSV
VLGQVDPQLVPYIIDLQSMHQFRQDTGTMRPVRRNFYEPSSAPGKGIVWEWENDNNSWTP
YDMDICITIQNAYEKQHPWLDLSSLGFCYLIYFNSMSQMNRQTQRKRRLRRRMDLAYPLT
MGSIPKSQSWPVGTNSGQPCSCQQCLLVNSTRAASNAILASQRRKVYVGNSNGTLAVRQS
NTFNGTTLWSAGTMPTGGTAKMEQVRSPSGMQVTTFSRSQSAPTGTQLPGQNNLNRPGTQ
RVAVLSTRASIPPGVPALPVKNLNGTGPVHPALAGMTGILMCAAGLPVCLTRAPKPILHP
PPVSKSDIKPVPGINGICRKTKKKHLKKSKNPEDVVRRYIQKVKSPPDEDCTICMERLVA
SSGYEGLLSHRGAKPELVGKLGKCGHMYHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTG
TQPPGKMEFHIIPHSLPGYTESKTIRIVYDIPTGIQGPEHPNPGKKFTARGFPRHCYLPD
NEKGRKVLKLLIVAWDRRLIFTIGTSSTTGECDTVVWNEIHHKTEFGSNLTGHGYPDPNY
LDNVLAELMAQGVSEANLKD
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggccgagctcaggggtgttgatctcggtgaatgggctgggcttcccaccgcag
aatctggcccgcgtggtggtgtgggaatggctgaacgagcacgggcgctggcggccctac
acagcggcagtctgccaccacattgagaatgtgctgaaggaggatgcccggggcagcgtg
gtgctggggcaggtggatccccagctggttccgtatatcatcgacctgcagtccatgcac
cagttccgccaggacacagggaccatgcgtccagtgaggaggaacttctatgagccctcc
tcggcccctgggaaggggatcgtgtgggagtgggagaacgacaacaactcctggactccc
tacgacatggatatttgcatcaccatccagaatgcctatgagaagcagcacccgtggctg
gacctctcctctctgggcttctgctacctgatctacttcaatagcatgtcgcagatgaac
cggcagacgcagcggaagcgccgactccggcgccgcatggacctggcgtacccgctcacc
atgggctccatccccaagtcccagtcctggcctgtgggcaccaactccgggcagccgtgt
tcctgccagcagtgcctgctggtcaatagcaccagggcagcctccaatgccatcctggcc
tcgcagcggaggaaggtgtatgtgggcaacagcaatgggactctggctgttaggcagagc
aacactttcaacggcacaacattgtggtctgcgggcaccatgccaactggggggacagct
aagatggagcaggtccgatcccctagcggcatgcaagtgaccaccttctcccgaagccag
agcgctcccactggcacccagcttcctgggcagaacaacctgaacaggcctggcacgcag
cgggttgcagtgctgagtaccagggcctccatcccaccaggggttcctgccctcccggtt
aagaatctgaatggaaccggaccagtccatcctgccctggcaggtatgacaggcattttg
atgtgtgctgctgggctgcctgtatgcctgacccgggccccgaagcccatcctgcaccct
ccgcccgtgagcaagagcgacatcaagccggtgcctgggatcaatggcatctgcaggaaa
accaagaagaagcacctcaaaaagagcaagaatcctgaggatgtggtgcgccggtacatc
cagaaggtgaagagcccgccggacgaggactgcaccatctgcatggagaggctggtggcc
tcgtccggctacgagggcctgctcagccacaggggcgccaagccggagctggtgggcaag
ttgggcaagtgcgggcacatgtaccacctcctctgcctggtggccatgtacaacaacggc
aacaaggatggcagcctgcagtgccccacctgcaaggccatctatggggagaagaccggg
acccagcccccagggaagatggagttccacatcatcccacactcgctgccaggctacacg
gaatccaaaaccatccgcatcgtctacgacatccccacaggcatccagggcccagagcac
ccgaaccccgggaagaagttcacagcccgaggcttcccccggcactgctacctaccggac
aacgagaaaggcaggaaggttctgaagctcctgattgtggcatgggaccgccggctcatc
ttcaccattggcacatccagcacgacgggagagtgcgacactgtggtgtggaacgagatc
caccacaagacagagtttggttccaacctcactggccacggctaccctgaccccaactac
ctggacaatgtcctggctgagctgatggcccagggggtctcggaagccaacctgaaggac
tga
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integrated database retrieval system
