KEGG   Trachemys scripta elegans (red-eared slider): 117888440
Entry
117888440         CDS       T07347                                 
Symbol
UBAP2L
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
tst  Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:tst00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tst04121]
    117888440 (UBAP2L)
   03400 DNA repair and recombination proteins [BR:tst03400]
    117888440 (UBAP2L)
Ubiquitin system [BR:tst04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    117888440 (UBAP2L)
DNA repair and recombination proteins [BR:tst03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117888440 (UBAP2L)
SSDB
Motif
Pfam: UBAP2-Lig UBA_4 UBA_RAD5A GIP1_N UBA_8 CUE Methyltransf_32 Comm
Other DBs
NCBI-GeneID: 117888440
NCBI-ProteinID: XP_034647708
LinkDB
Position
16:complement(9945853..9988601)
AA seq 1176 aa
MMTSVGTNRARGNWEQTQTQSQTQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLIDI
TGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKKKGVSGQKDSGQTEPSEEG
KENRDRDRDYSRRRGGPPRRGRGTSRGRECMSLPFNSNYNYHVRGQENGLDGGKSGGSSG
RGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEPTSTEENYGNSNNTWNSTGSF
EPDDGTRLDFIGGEGSNYPRKFDTAPGAWRTATEEWGTEDWNEDVGTLNPLPMIEGEQNL
LAEDCRNSPKPGSLFQELHCTTQLSETKIFTASNVSSVPLPAENVTITAGQRIDLAVLLG
KTPSSLENESSNLDSTQAPSLAQPLVFSNSKQTAISQPASGNAFPHHSMVSMLGKGFGDV
GEAKSSSTTGSQFLEQFKTAQALAQLAAQHAQPGGSNTSSSWDMGSPAQSSALVQYDLKN
PTDSSVHSPFTKRQAFTPASAMMEVFMQDKQPVVTASTTAPPPPSSPLPSKTNPVPQMSP
GSSDNQSSSPQPVQQKLKQQKKKASLTSKIPALAVEMPGSADISGLNLQFGALQFGSEPV
LSEYESTPTTSASVSQSQSSLYTSTASESSSNQSQESGYQGGTIQTATYTSQNSAQGPLY
EQRSTQTRRYPNSISSSPQKDLTQAKNGFSSVQPTQLQTTQAVEGAPGPVVKSDSPSAPN
IAPLNDSVSASSLLTTASQHSSALSSLNHAEELPSTTTAQLSSTLPTQQNSLSSSTSSGR
TSTSTLLHTSVESEASLHSSASTFSTSSSTVSAAPPVVSVSSSLSSVSSLGLNLSNNSTV
TASTRSSVATTSGKAPPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPL
DYYSIPFPTPTTPLTGRDGSLSSNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHT
TQQTFLNPALPPGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASAT
PFQQPSGYGSHGYSTGVSVTSSNTGVPDISGSVYSKTQQSFEKQGFHTGTPAASFNLPSA
LGSGGPLNPATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQVLQQLPYLQMILCCQR
QQEDQSGTGQRSQGSSIPQKSQANKSTYNSYNWGAN
NT seq 3531 nt   +upstreamnt  +downstreamnt
atgatgacatcggtgggcactaaccgagcccgggggaactgggagcagacacagacacag
agccagacacagcacaagcagcggccacaggccactgcagaacagattcgacttgcacag
atgatttcggaccacaacgatgctgacttcgaggagaaggtgaaacaactgattgatatc
acgggcaagaaccaagatgagtgtgtgattgctctgcacgactgtaacggggatgtcaac
agagccatcaacgtgctgctggaggggaatccggacacgcattcctgggaaatggttggg
aagaagaaaggagtctcgggacagaaggacagtgggcagacagaacccagtgaagaaggc
aaagaaaaccgggacagggatcgggattacagccggcgacgtggcgggccaccgagacga
ggccgaggcaccagccgtggaagagagtgtatgagcctgccctttaatagcaactataac
tatcatgttcggggccaggagaatggactggatggtggtaagagtggaggctcctctgga
agaggcacagagagagggagacggggccgcggacgaggcagaggtggctctggaaggcgg
gggggaagattttctgcccagggaatgggaactttcaacccagctgattatgcagagcca
accagcacggaggagaactatgggaatagcaacaacacatggaacagtaccggtagcttt
gagcccgacgatgggacaagacttgatttcattgggggtgagggctcaaattatccccga
aaatttgacactgctcctggtgcatggaggacagcgacggaggagtggggaacagaggac
tggaatgaagatgtaggtactctcaatcccctccccatgatagaaggggaacaaaacctg
ctagctgaggactgtaggaatagccccaaaccaggctccttgttccaggaactgcactgc
acgactcagctttcggagaccaagatcttcactgcctccaatgtgtcttcagtgcctctg
cctgcagagaatgtgacaatcacagctggccagagaattgatcttgcggtgctgttagga
aagactccctcttctctggagaatgagtcctcaaacctggattcaacccaggctccttct
cttgcccagcctcttgtgttcagcaattccaagcagacggctatatcccagcctgcatct
gggaacgccttccctcatcacagcatggtgagcatgctggggaagggctttggagacgtc
ggagaggccaaaagcagcagcaccacaggctctcaattcctggagcagttcaagacagct
caggctctggcgcagctagccgctcagcacgcccagcctggcgggagcaacacctcctcc
tcctgggacatgggatccccggcgcagtcctcggctctcgtgcagtacgatctaaagaac
ccaacggactcatccgttcacagccccttcaccaagcgtcaggctttcacgccagcctca
gcgatgatggaggtgttcatgcaggacaagcagcctgtggtgacagcctctacaacggca
ccgccccccccatcttcccctctgcccagcaaaaccaaccctgttccccagatgtcccca
gggtcatcggacaaccagtcctccagtccccagccagtgcagcagaaactcaagcagcag
aagaagaaagcctccttgacatccaagattcctgctctcgcggtggaaatgcctggctca
gcagatatctcagggctaaacctgcagtttggggcattacagtttggttcggagcctgtt
ctctcggagtacgaatcaacgcccacgacgagcgcctctgtgagccagtctcaaagcagc
ctctacaccagcactgcgagtgaatcttcgtccaatcaaagccaggagtctggttaccag
ggcggcacaatacagacagcaacgtatacctcccagaacagcgctcagggaccactgtat
gaacagagatccacccagaccaggcgatacccaaactccatctcctcctcgccccagaaa
gacctgacccaggccaagaatggtttcagctctgtgcagcccacgcagttacaaaccacg
caggccgtcgaaggtgctccaggccctgtggtgaaatcagattccccctctgcccccaat
atcgcacctctgaatgattcagtatcagcatcatccctgctgacaacagccagccagcac
tcatcagctctgagtagcctgaaccacgctgaggagctccccagtacgaccaccgcccaa
ctcagcagcacgttacccacccagcagaacagcctctcctcgtccacgtcctctgggcgc
acatcaacgtcaactcttctgcacactagtgtggagagtgaagcaagcctccattcttct
gctagcactttttccacctcctccagcacagtctcggctgccccacctgtggtcagcgtc
tcctccagtctgagcagcgtcagcagcttgggcctgaacctcagcaacaactccaccgtg
acagcctccacgcgcagctctgtggccacaacatcaggaaaagcccctcccaacctccct
cctggagttccaccattgttgcctaatccgtacatcatggctccagggctcttacatgcc
tatccgccacaagtgtatggttatgacgacttgcagatgcttcagacgagattcccattg
gattattacagcatcccattccctacccccaccaccccgctgactggaagggacggcagc
ctgagcagcaatccgtattctggtgacctcacgaagttcggccgaggcgacgcctcctcc
cctgctccagcaacaactctggcgcagcctcagcagaaccagacgcagacgcaccatacc
acgcagcagacgttcctgaacccagctctgcctcctggctacagttacaccagtctgccc
tactacacaggggtaccagggctccccagtaccttccagtatgggcccgccgtgttccct
gtcgctcctacctcttccaagcagcatggtgtgaatgtcagcgtcaacgcatcagcaacc
cctttccagcagcccagcggctatggctctcatggatacagcactggtgtatccgtgaca
tccagtaacacgggagtgccagacatctcgggctccgtctactccaagacccagcagtcc
ttcgagaagcagggatttcacactggaaccccggcagcctcgttcaacttgccttcagca
ctaggcagcggcggccccctcaaccccgcgacagccgcagcgtacccaccggcgccgttc
atgcacatcctcaccccgcatcagcagccccactcgcagatcctccaccaccatttgcag
caggacggccaggtactgcaacagcttccatatttgcagatgatactgtgctgccaacgc
cagcaggaggaccagagcggcaccggacagcgcagccagggcagctccatcccccagaaa
tcccaggccaacaagtccacctacaacagctacaactggggcgccaactga

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