Trachemys scripta elegans (red-eared slider): 117888537
Help
Entry
117888537 CDS
T07347
Symbol
LIMA1
Name
(RefSeq) LIM domain and actin-binding protein 1
KO
K23026
LIM domain and actin-binding protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117888537 (LIMA1)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
117888537 (LIMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
117888537
NCBI-ProteinID:
XP_034647917
LinkDB
All DBs
Position
16:complement(11581447..11619879)
Genome browser
AA seq
776 aa
AA seq
DB search
MEPSPFNRRQWTSQSLRITAKELSLVNKNKSSALLERFSKYQKAAEEATAEKKRNNTENL
PPHFKRGTLSVLKKKWENPILGTESGTETLQSNCTEVRQKVASPSVGVETNPASEAETDQ
TSRVYTKSQLRSPSGAFDQLKYPSVDSKESKIYSLESDKMENCVRESRQEVGKPEASENP
DSSGKIEKYNIPLNKLKMMFEKGDATQTKIFRDQSRTTGSRRISENSFSSEDLDICSGER
SHNVSDHLVCSSPTFSPDKPESRRNLEMPHLTETSIKDRLAKYQAAVSKQGSPTGHVNEI
QASDSEIKNYKSEQKENVPPSPEDSVSHQDGDKVFFREKSLGFHSNLSEDSTIELNSQSE
TEAKRRIYTKQQSSDSKPANQTDTSPPKVVKKFQLPVKETCVACQKTVYPMERLFANQQV
FHISCFRCSHCNSRLSLGTYASLRGNIYCKPHFNQLFKAKGNYDEGFGHKPHKELWVSKT
ENEESLEKSAHTVNTIEGPQSPGVEDAPIAKVGVLAASMEAKAAALPGREEKPAETKKLR
IAWPPPSELGSQGSALEEGIKVFKPKWPPEDEVSKPDVQEDVDLDLKKLRRTSSLKERSR
PFTVAASFRTMSVKGHKTENVSSPSKADKVTFKQNEELESEAVMERKRKEKRAENGNIQN
TEEKNKELEEERGREVPDIMADREENLVQNGQVGMETDEEENATVQQPSPNKEIFDSNSP
KHFSLLNMVPAKELSPSQNSKSKDVVFWEDEDVEDLSVEGQIKRNRYYEEEDEDEE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggagccatctccatttaacagaagacaatggacttcgcagtctctgagaatcactgcc
aaagagctttctctagtcaacaagaataagtcatcagctctccttgagaggttctccaag
tatcagaaagcagccgaagaagctactgcagagaaaaaaagaaataacacagaaaatctt
cctcctcattttaaaagggggactctgagtgtgttaaagaagaagtgggagaatccaata
ttgggaacagagtctgggacagaaaccctacaaagcaactgtactgaggttaggcagaag
gttgccagccccagtgttggagtagaaaccaaccctgcttctgaagcagaaactgaccaa
acatcaagggtctatactaaatctcaactccgatcgccttctggagcctttgaccaattg
aaatatccaagtgttgacagcaaggagtctaagatctactcactggagagtgataaaatg
gaaaattgtgtaagagaatccagacaagaagtaggcaaacctgaggccagtgaaaacccg
gactcttcggggaagatagagaaatataacatcccactaaacaaactaaagatgatgttt
gagaagggcgatgcaactcaaacaaagatttttcgggaccagagtaggactacaggtagc
aggagaatctctgaaaacagcttctcttcagaggaccttgacatctgctctggagagagg
agccataatgtttcagatcacctggtctgtagctctccaacattcagcccagacaagcca
gagagtagaagaaacctggagatgcctcacctaacagaaacttcaataaaggatagactg
gcaaagtaccaggcagctgtgtccaagcaaggcagccccacaggccacgtgaatgagatt
caagccagtgacagtgaaatcaagaattacaaatctgagcagaaggagaatgtgccacca
agtcctgaggactctgtttcccatcaggatggggataaggttttcttcagggagaagagt
ctgggtttccactccaatctttctgaagatagcaccattgaactgaactcgcagagtgag
actgaagccaagagacgtatctacacaaaacagcagagctctgattccaaaccagccaac
cagactgacacctctccaccaaaagtagtgaagaagtttcagttgccagtgaaagaaacc
tgtgttgcgtgtcagaagacagtgtacccaatggaacgtctctttgccaaccagcaggtg
tttcatatcagctgcttccgctgttcacattgcaatagcagactcagtcttggaacatat
gcatctctacgtgggaatatttattgcaagcctcacttcaatcagctctttaaagccaaa
ggcaactatgatgaaggttttgggcacaaaccccacaaggaactatgggtaagcaaaact
gagaatgaagagtccctggagaaatctgcccacactgtaaatacaatagaaggccctcaa
agtccgggagtagaggatgccccaattgcaaaggtgggagttcttgcagctagcatggaa
gcaaaagctgcagctttgcctggaagggaagagaaaccagcagaaacaaagaaactgagg
attgcctggccacctccatcagagctaggtagtcaaggaagtgcattggaagagggtatc
aaagtatttaagccaaagtggcccccagaagatgaggtgtcaaagccagatgtgcaggag
gatgtggacctggatctcaaaaagctacgaagaacatcctcactgaaggaaagaagccgt
ccatttacagtagcagcctcatttagaacaatgtctgttaagggccataaaacagagaat
gtatcttctccttccaaagcagataaggtcacgttcaaacaaaatgaagaactagagagt
gaggcagtgatggaaagaaagcgaaaggaaaaaagagctgagaatgggaacatccagaac
actgaagagaagaataaagaactggaggaagaaagaggaagggaagtgcctgatatcatg
gcagacagggaagagaacttggtacagaatggtcaggtgggtatggagacagatgaggaa
gaaaacgccacagtgcagcagccatctccaaataaagaaatatttgattccaactctcct
aaacatttcagcttattgaacatggtccctgctaaggaattatcccctagccagaatagc
aaatccaaagatgttgtgttctgggaagatgaagatgtggaagatttgtctgtggaagga
cagatcaagaggaatcgttactatgaggaagaggatgaagatgaagaataa
DBGET
integrated database retrieval system
