Trachemys scripta elegans (red-eared slider): 117888544
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Entry
117888544 CDS
T07347
Symbol
BICRA
Name
(RefSeq) BRD4-interacting chromatin-remodeling complex-associated protein isoform X1
KO
K25612
BRD4-interacting chromatin-remodeling complex-associated protein
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117888544 (BICRA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tst03036
]
117888544 (BICRA)
Chromosome and associated proteins [BR:
tst03036
]
Eukaryotic type
Chromatin remodeling factors
GBAF(ncBAF) complex
117888544 (BICRA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLTSCR1
Motif
Other DBs
NCBI-GeneID:
117888544
NCBI-ProteinID:
XP_034647937
LinkDB
All DBs
Position
16:complement(2010040..2126670)
Genome browser
AA seq
1728 aa
AA seq
DB search
MDDEDGRCLLDVICDPQALNDFLHGSEKIDSDDLLDNTGDATSAFFEGTGLHVQESSGNH
LNTEQNQNTTSVDLDFLEDDILGSPSGGGANLQNSDQPCDILQQSLQEANITEQTLEAEA
ELDLGSFQLPTLQPVVQTASDGTPQIFSSGADLIGLQQPAVLTHQALVQQSVGADVVNKA
ISVQPFLQQVGLGNVTIQPISNLQGLPNGSPSGTLGIGPIQVVGQQVMAINQSAQQIIAK
QVQPSQVTTMPVGSYITQTAPEQQQVTLASTGVSPQNAGLVIQKNLPSVATTTLNGNSMF
GNVSATPGSQPLTVTSNLSSPLVQAQNVIIHRTPTPIQPKPAGVLQQKLYQITPKPFGPN
NTTLTIQNEAALQQQKAQQNLTFMAGKPGQNVVLSGFPQGLPANMFKQPPPQQQALSKPM
SVHLLNQGSSIVIPAQHVPQAMLQGQNQFLLPGQLAGASAVQIPQQLSALQANMGGQILT
TSHPSGQAHIITSQGPGGQLITNQALPAQILTNQNIASQLNLGQVLTSQNAHGTAHILSA
PIQLQPGQVGQPTLFQMPVSLAGSLTTQSQPSVAASLASGAISQTGQTVIQGVTLPNQVA
MLNSTENLNQAVSIQASATTSSQSPGLIQPQPASGTSLLPSSDQSSILTVQAASQPPAPP
PLQLNVQQQPSQQPSQLPVTSQPSPNLASSPEKIILGQTAAGTVLNQDSMQMFLQQKDRS
QQQQQFYPASLKMQQENNLNQSTVPPHLPMPLPIYSIATTALSTTSSVPASVIVSSSAQN
QSLATVESKGPNLIPQFSASHSQQALACQLPTGQQKLPGASPSHSLPHPPMGESPQLQPS
HLSQMQSPHQSRPPSQPQPLSRPPSRPHSRPPSQPQTLSRPPSEPLSRSCTPQTQMQNLY
VIQNQITSSPHGPTQHPLRPPSQPQVQFQPPQSQAEGQPQLATPPHLQLQVQLAPQIPPQ
SETQVPARLQSQIQAPTESQHTHSPHFQFPSQGQIKPPVPTQTLHLTPEQQRSFQMVPNQ
FQTLSAIPNPTPQQKQLLDRFQQVPQGIILQTKHQTSTSQVSSALSHFSSQPSSVLVSSQ
GQPVAVTTTQAPVHSHPSVPAAVQPSTAGIAAPVPAESKTFSSGATSVSGGKVTTVPGKP
GTPLAVQQPVQAKPGVISSISGLNLGKGPLQIQVVGKGLSQLMPSVPVPSQQQYDSKLGS
LKKTPTLQPSKEACFLEQLHKHQGAVLHPDYKTSFRSFEDALQRLLPYHVYQGMLPSTHD
YRKVDEEFETVSTQLLKRTQAMLNKYRLLLLEESRRVSPSAEMVMIDRMFIQEEKTMLAL
DKQLAKEKPDEYVSSSSRSQSLTSSLALASVSSITPASENLKVPPVQTATQIHPTKLVIK
HSGGSPSVTWAKASPSLDGDEDALPSRSKPPIKTYEARSRIGLKLKIKQEAGLSKVVHNT
ALDPVHQPPPVCTVIKTADQHSSAAPTATTTAGQMNGTIDHVTSAPVEKKPIVTYCRLPL
RKTYRENVDAFIADKATDACPKGGIPKVDTIPSTLVIKQEDGSKGVITSLKTHETPTVVV
AEKSKPEESSKLLFFNRSDARSLVMQDSPAPPKTDDSTSGLMKELAEVEDEFYHGMIKTE
PPDHSSGSELTWEVPLPPAKRRKSESFDVDNASFSSDSPQDDSLNEHLQSAIDSILNLQQ
PQTGGQNIRTPSSSYNSSSSPFSSPVHRTDTYLAPNHNGGLGARTLNR
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatggccggtgcttgttagatgtaatttgtgatcctcaggctttgaat
gattttttacatggatctgaaaagattgacagtgatgatctcctggacaacacaggagat
gcaaccagtgccttctttgagggtactgggctgcatgtacaagaatcctctggcaaccat
ctgaacactgaacagaatcagaacacaacaagcgttgacctcgactttttagaagatgac
atcctggggtcaccatctggtggtggggcgaatcttcagaactcagaccagccctgtgac
attctccagcagagcctgcaagaggctaacattacagaacagactctggaggcagaggca
gaactggacctggggtctttccagctccctacacttcagccagtggttcagactgcctct
gatggcacgccgcagattttctccagtggggctgacctaattgggttgcagcagcctgca
gtcctgacacatcaagcgctggtgcagcaatcagtgggagcagacgtcgttaataaggcc
atcagtgttcagccttttcttcagcaggttggcttggggaatgttaccatacagccaatt
tccaaccttcagggcttgcctaatggaagcccaagtgggacattgggaattgggccgatt
caagtagttgggcaacaggtgatggctattaaccagtcagctcagcagatcattgcaaaa
caagttcagccctcccaagtgaccaccatgcccgttggcagttacatcacccagacagca
cccgagcaacagcaggtcaccctcgcttctacgggggtgtctccacagaacgctggcctt
gtcatccagaaaaacctgccctccgtggccactaccacgctgaatggaaactccatgttt
gggaacgtatctgccaccccaggctcccaacctctcacagtcacatcgaacttaagcagc
ccattggtgcaggcccagaacgtgattatccaccgaacacccacgccaattcagcccaaa
cctgcaggggtcctgcaacagaagctgtaccagatcacccccaagccatttggtcccaat
aataccaccctgaccatccagaacgaggctgccctgcaacagcagaaggcccaacagaac
ctgacttttatggcgggcaaaccaggacagaatgtggtgctgtctggattcccgcaaggg
ctgcctgccaacatgttcaaacaacctccaccgcagcagcaagccctcagcaagcccatg
agcgtccacttgctaaaccaaggcagcagtattgtcatccccgcgcagcacgttcctcag
gccatgttacagggtcagaaccagttccttcttcctgggcagttagcaggtgcctctgct
gttcagataccccagcagctctcagccttgcaggcgaacatgggaggacagatcctaaca
acttcacaccccagtggccaagcccacatcataactagccaagggcctggtggacagctg
ataaccaatcaggccttgcctgcccaaatcctcaccaatcagaacatagctagccagctg
aatctggggcaggtgcttacatcgcagaatgcgcatggcacggctcacattctttctgca
cctattcaactgcagcctggtcaggtgggtcagccaactttgttccagatgcctgtctct
ctagctggcagcttgaccactcagagtcagccctccgttgcagcctcattggccagtggg
gccatcagtcagactgggcagaccgttatccaaggtgtaactctgcctaatcaagttgct
atgttaaattccactgagaacctcaaccaagctgtgagcattcaggcatctgccaccacc
agcagtcagagtccaggcctcattcagccacagcccgcttctggcaccagcctgctgcca
agcagtgaccagtcctctatactgaccgtccaggctgcatcccagcctccagcgccacct
ccgcttcagttgaatgtgcagcagcagccttctcaacagccatcacagctacccgtgact
tcccagcccagcccgaacttggcatccagtccagagaagatcatcttgggccagacagct
gccggaacggtcctaaaccaagattccatgcagatgtttctgcaacagaaggatcggagc
cagcagcagcagcaattttatccggcatccctgaaaatgcagcaggagaacaatctgaat
cagtccacagtaccaccacaccttccaatgcctctgcccatctacagcatagccacaaca
gctctcagcaccacaagcagtgtcccagcatcagtgatagtgagcagcagtgcccagaat
cagagtctggcaacggtggagtccaaaggaccgaatcttatacctcagttctcagccagc
cattcccaacaggcactggcttgccagttacccacagggcaacagaagctccctggagcc
tccccgtcccattcgctacctcatcctccaatgggggagagtccccagctccagccctca
cacctctcacagatgcagtccccccaccagtcccgtcctccgtcacagccgcagccactt
tcccgaccaccctcccggcctcactccaggcctccctcccagccacaaactttgtccagg
cctccttctgaacccctctcccggtcctgcacccctcaaacgcaaatgcagaacttgtac
gtgatacagaatcaaatcacatcatccccccacggtcccacccagcaccccttacggccc
ccgtcgcagcctcaggtacagttccagccaccccagtctcaggccgaagggcaacctcag
ctggcaacacctccacatctgcagctacaagttcagcttgcccctcagatcccgccccag
tctgagacccaggtgccggcacggctgcaatcccagatccaggctccaaccgagtctcag
catactcattccccacatttccagttcccttcccagggccaaatcaagccgccagtccca
acccagacccttcacctaacaccggaacaacagaggagttttcagatggtcccaaatcaa
ttccagacactctctgcaattccaaatcccactcctcagcagaagcagctattggacagg
ttccagcaggtgccccaggggattatcctgcaaacgaaacaccagacttccaccagccag
gtgtcatcagctctgagccacttcagcagccagccttcatctgtcctggttagcagccaa
ggacagccagtagcagtgacaacaacgcaagcaccagtccacagccacccatctgtcccc
gctgcagtccagccttctactgcaggtatagctgctccagttcctgcagagagtaaaaca
ttttccagtggcgccacatctgtttctggggggaaagtgactacagtgccagggaaacca
ggaacacctcttgctgtacagcagccagttcaggccaagcctggagtgattagctccatt
tccggcctgaatcttggaaaaggccccttgcagatccaggtagttgggaaaggattatca
caactcatgccctcagtcccagtcccatcccagcagcagtacgatagtaagcttggaagt
ctgaaaaaaactcctacactacagcccagcaaagaagcttgtttcttggaacagttacat
aaacatcagggagcagtgttgcaccctgactataaaacttcattccgatcgtttgaagat
gccttacaaaggcttctaccctatcatgtctaccaggggatgcttccctctacccacgac
tatagaaaggtagatgaagagtttgaaacagtgtccacccaactgctgaaacgcacacaa
gctatgttgaacaaatatcgtctgctgctcttagaggagtctcggagagtcagcccttct
gcagagatggtgatgatcgatcgaatgtttattcaggaagaaaagaccatgttggctctt
gataaacagctagcaaaggagaaaccagatgagtatgtttcatcatcttctcgctcacag
agcctcacttcctctctggctctagcctctgtatccagcatcaccccagcttctgagaac
ctaaaggtgcctccagtgcagacagccacccagatccaccccaccaaattggttatcaag
cacagcggaggctccccttctgtcacatgggcaaaagcttcaccttctttggatggagat
gaggatgccctaccctcaaggagcaagcccccaatcaaaacttatgaggcacggagccgg
attgggcttaagctgaagatcaagcaggaggctggtctcagcaaggtggtgcacaacact
gccttggacccagttcaccagccacctccggtgtgcacagtcatcaaaacagctgaccag
cactcttcagctgcccccaccgccaccaccactgctgggcaaatgaacgggactattgac
catgtaacctcagcgcctgtggagaaaaaacccattgtgacctactgcaggcttccgctt
cgtaagacttacagagagaacgtggatgcttttatagcagataaagccactgatgcctgt
ccgaagggaggcatcccaaaggtcgataccatccccagcacccttgtgatcaagcaggag
gacggctccaaaggcgtgatcacctctctcaaaacccatgaaaccccaactgtggtggtg
gcagagaagagcaagccggaggagagctccaagctcctgtttttcaacagaagcgatgcc
cgttctctggtgatgcaagacagccctgcccctccgaagaccgatgactctaccagtggc
cttatgaaggaacttgcagaagtagaggatgagttttatcacggaatgataaaaacggag
ccccctgaccacagctccggctcggagctcacctgggaggttcccttgcctccagctaag
cgcaggaagtcagagtcctttgatgtggataatgccagcttctccagcgacagcccccag
gatgactcccttaatgagcacctacagagtgccattgacagcattctcaacctgcagcaa
cctcagactgggggtcagaacatccggacaccctcctcctcttacaactcctcttcctcc
cctttctcttcacctgtccatcgtacagacacttaccttgcccctaatcacaatggcggc
cttggagcaaggacgttgaacagataa
DBGET
integrated database retrieval system
