Trachemys scripta elegans (red-eared slider): 117888547
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Entry
117888547 CDS
T07347
Symbol
HCN3
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 isoform X1
KO
K04956
hyperpolarization activated cyclic nucleotide-gated potassium channel 3
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tst04040
]
117888547 (HCN3)
Ion channels [BR:
tst04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
117888547 (HCN3)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Nup188_SH3-like
Motif
Other DBs
NCBI-GeneID:
117888547
NCBI-ProteinID:
XP_034647944
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Position
16:complement(9404099..9423015)
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AA seq
974 aa
AA seq
DB search
MEAAPGTEPRDRAQGADPRDKPQALDGAAPGRPEGSVGSGPGQPPSAVTPAEAPASQPGA
GKAEAAEQILSDAEDPAALAGTFVQRQLGAMLQPAVNKFSLRMFGSHKAVELEQQRVKSA
GSWIIHPYSDFRFYWDLIMLLLMVGNLIILPVGITFFKDENTPPWIVFNVLSDTFFLADL
VLNFRTGIVVEDNTEIILDPHTIKMKYLKSWFLVDFISSIPVDYIFLVVDLETQVDSDVY
KTARALRIVRFTKILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIVNLIGMMLLL
CHWDGCLQFLVPMLQDFPEDCWVSINHLVNDSWGKQYSHALFKAMSHMLCIGYGQQAPEG
MTDVWLTMLSMIVGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPGDTR
QRIHEYYEHRYQGKMFDEENILGELSEPLKEEIINFNCRNLVANMPLFASADPNFVTATL
TKLRFEVFQPGDFIIREGTVGKKMYFIQHGVVSILTKGNKETKLSDGSYFGEICLLTRGR
RTASVRADTYCRLYSLSVDNFNEVLEEHPMMRRAFETVAMDRLDRIGEGAPAPGKKNSIL
LRKRAEHSSGAMNNEMIQQIVKHDRDMAHNIQDLQQMAVGRELSGKPVIWEPLVHAPLQT
AAATTNVAIALTHQQSLQAHIFLPPSSISSPLSPEATLLTRQVRRSQPSLGGSRPSSVSS
QSGVQSHLQTPAANSPSSPMVQSQSPLESGGQKAGHVGLPQPRLVQKGEPLAIAKQPLTG
SQPQLSKSRGTSVSTSLLQQPAGAPSPSSEQALPAGRTLHYSLSRATGSHISLLMQPQQL
VKHRSIQGLPIGRLTQDVRLLSASQPSLPNKVAQQVDGSSSPQGRKSAGNLAHRSSPSVA
GLLTKPPPGVPGQPAHPQQMPSGSLVQSSRPVSGASTPQSPVSTPRHAAGPSRKGSVAFS
PEVESGKPKLPSNI
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagcgccgggcacggagccccgggacagggcgcagggcgccgacccgcgggac
aagccccaggcgctggacggggcggcccccgggcgccccgagggtagcgtgggctctggg
ccaggccagccgcccagcgcagtaaccccggcggaggcgcccgcctcgcagcccggggcc
ggcaaggcggaggcggcggagcaaatcctgtcggacgccgaggaccccgccgcgctagcc
ggcaccttcgtgcagcgccagctcggggccatgctgcagcccgcggtcaacaagttctcg
ctgcgcatgtttggcagccacaaggcggtggagctggagcagcagcgggtgaaatcggcc
gggtcctggatcatccacccctacagcgacttcaggttttactgggacctcatcatgctg
ctgctgatggtggggaacctgatcatcctgcccgtaggcatcacttttttcaaggatgag
aacacaccaccttggattgtcttcaacgtgctctcagacaccttcttcctggccgacctg
gtgttgaacttccgcacgggcatcgtggtggaggacaacacggagatcatcctggacccg
cacaccatcaagatgaagtacctgaagagctggttcctggtcgatttcatctcctccatc
cccgtggattacatcttcctcgtcgtcgacctggagactcaggtggactccgacgtctac
aagacagcgcgggccctgcgcatcgtgcgcttcaccaagatcctcagcctgctgcgtctc
ctacggctgtcccgcctcatccgctacattcaccagtgggaggagattttccacatgacc
tacgacctggccagcgccgtggtgcggatcgttaacctcattggcatgatgctgctgctg
tgccactgggacggctgcctgcagttcctggtgcccatgctgcaggatttccctgaggac
tgctgggtctccatcaatcacctggtgaacgactcctgggggaagcagtactcccatgcc
ttgtttaaggccatgagccacatgctctgcattgggtacggccagcaagctccggagggg
atgaccgacgtctggctcaccatgctcagcatgattgtgggtgccacctgctacgccatg
ttcattggccacgccactgccctcatccagtcgctggactcctcccgccggcagtaccag
gagaagtacaagcaggtggagcagtacatgtcgttccacaagctgcccggggacacgcgc
cagcggatccatgagtactatgagcaccgctaccagggcaagatgtttgatgaggagaac
atcctgggggagctgagtgagcctctcaaagaggaaatcatcaactttaactgccggaac
ctggtggccaacatgccgctgtttgccagcgccgaccccaactttgtgacggccacgctg
accaagctgcgcttcgaggtcttccagcctggggacttcatcatccgcgagggcaccgtg
ggcaagaagatgtacttcatccagcacggcgtggtcagcatcctcaccaagggcaacaag
gagaccaagctgtccgatggctcctacttcggggagatctgcctgctgacgcgggggagg
cgcacggccagcgtccgggctgacacctactgccgcctctactcactctcagtggataac
ttcaatgaggtgctggaggagcaccccatgatgcgtagggccttcgagaccgtggccatg
gaccgcctggaccgcatcggtgagggagcgcccgccccaggtaagaagaactccatcctc
ctgcgcaagcgagcagagcacagctcgggggccatgaacaacgagatgatccagcagatt
gtcaagcacgaccgggacatggcccacaacatccaggacctgcagcagatggcggtgggc
cgggagctgagtggcaagccagtgatctgggagcccctggtgcatgcgccactgcaaacg
gcagctgccaccaccaacgtggccattgccttgactcaccagcagagcctgcaggcccac
atcttcctgcccccctcctccatctccagcccactctcacctgaggccaccctgctcacc
aggcaagtgcgcaggtcccagcccagcctggggggctcccggccctcctcggtgagctcc
cagtccggcgtacagtcccacctgcagacgcctgcagccaactccccttcatcccccatg
gtccagtcccagtcgcctctggaaagtgggggtcagaaagctggccacgtgggactgcca
cagccaaggctggtgcagaagggagagcccctggcgatagcaaagcagcccctgacgggc
tcccaaccccagctctccaagtcccgaggcacctcagtttccacgtcacttctgcagcag
ccagcaggggctccgtcccccagctctgagcaggcgctcccagcagggagaactctccac
tacagcctgtcccgagccaccggctcccacatctcgctgctgatgcagccgcagcagctg
gtgaagcacaggagcatccagggcctacccatcgggaggctcacccaggacgtccggctc
ctgtcagcatctcagccgtccctgcccaataaagtcgcccagcaagtggacgggagctcc
tcccctcagggcagaaagtcagcggggaacctggctcacaggtcatctccctcggtagct
ggactcctcaccaagccaccccctggggttccaggccagccagcacacccgcagcagatg
ccttcaggatctttggtccaatccagccgtcccgtgagcggagcgtccaccccgcagtct
cccgtctctacgcccaggcatgcggcaggcccctcccgcaagggctccgtggcattcagc
cctgaggtggaaagtgggaagcccaaactcccgtccaacatatga
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