Trachemys scripta elegans (red-eared slider): 117888551
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Entry
117888551 CDS
T07347
Symbol
EFNA1
Name
(RefSeq) ephrin-A1 isoform X1
KO
K05462
ephrin-A
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117888551 (EFNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
tst04052
]
117888551 (EFNA1)
00536 Glycosaminoglycan binding proteins [BR:
tst00536
]
117888551 (EFNA1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
117888551 (EFNA1)
Cytokines and neuropeptides [BR:
tst04052
]
Cytokines
Growth factors (RTK binding)
117888551 (EFNA1)
Glycosaminoglycan binding proteins [BR:
tst00536
]
Heparan sulfate / Heparin
Axon guidance molecules
117888551 (EFNA1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tst00537
]
Others
117888551 (EFNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
117888551
NCBI-ProteinID:
XP_034647954
LinkDB
All DBs
Position
16:complement(9512909..9518951)
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AA seq
206 aa
AA seq
DB search
MALRWASLLALCCWLVAADRHPVFWNSSNPKFLADDYTVEVRLNDYLDIICPHYEEGSVT
PRAMERYTLYLVEYEEYAACKPHSKDQIRWECNKPAALHGPERFSEKFQRFTPFTLGKEF
KEGHSYYYISKPIHHHGDGCLKLKVTVAGKATGTPPVHTPMRKGGIQADDADAQVLRSVG
QNSALRGSSPVTLLSLLLPLLVPQGL
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgctgggcgtccctgctcgctctgtgctgctggctggtggccgccgaccgg
cacccggtcttctggaacagctccaaccccaagttcctggcggacgactacaccgtggag
gtccggctcaacgactacctggacatcatctgcccacactatgaggagggcagcgtgact
ccccgcgccatggagcgctacaccctctacctggtggagtatgaggagtacgcggcctgc
aaaccccactccaaggaccagatccgctgggagtgcaacaagccggccgccctgcatggc
cccgagcggttctcggagaagttccagcgcttcacacccttcaccctggggaaggagttc
aaggagggacacagctactactacatctcgaagccaattcaccaccatggcgacggctgc
ctgaagctgaaggtgactgtggctggcaaagccactgggacaccgcccgtccacaccccg
atgcggaagggggggatccaggcagacgacgcggacgcgcaggtcctgaggagtgtgggc
cagaactcggcgctgcgggggagcagccctgtcaccttgctcagcctcctgctgcccctg
ctggtgccgcaaggcctgtga
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integrated database retrieval system
