Trachemys scripta elegans (red-eared slider): 117888622
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Entry
117888622 CDS
T07347
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04517
IgSF CAM signaling
tst04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117888622 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117888622 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117888622 (SPTBN4)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117888622 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
117888622 (SPTBN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
PH_9
PH
Helical_needle
PH_11
PH_17
Motif
Other DBs
NCBI-GeneID:
117888622
NCBI-ProteinID:
XP_034648075
LinkDB
All DBs
Position
16:7767746..>7811882
Genome browser
AA seq
2005 aa
AA seq
DB search
MVYMIDWMEEMQAPLLSREVGKHLLEVEDLLQKHALLEADVAAQSERVQALNQAALKFCE
LAGYQPCDPQIIRNRVTHVQTCLEELCQRAAQRRTELEASRHLWAFFQELEEAEAWVREK
EQILASKPCGKDLSSVLQLSGQHKVMLGELGGRRALLHQAMKKGEQLVATQGPGAARLQE
KLREVRQRWKKLEEVTGTHQQKLQEALSFYQFSAETDDLLAWLQDTYRLASSDDFGHDEY
SSQALLRKHAAVAQELERHRAPVLALRAQLARLAPQHHQVVDVQIRIVEVEQLYGEVAEV
AVLRHQWLQDALAVYRMFGEVRACEGWLDEKEQWLSGMHVPQELEDVEVVQHRFESLDQE
MNSVMGRILDVNETVQQLVEGGHPSASEVQSCRDHLNGRWNRVVELVEQRKDHLSSVLTI
QNYLLECTEIKAQIREKRRAVEASQYSSGDLGGVLALQRKLSTMEAALVVLEPKLLELQQ
EGEALATAHPAQALTVLLHFEEISEEWEALKRTLQGCEDSLSVASRLQQFIQDLDNFLTW
LVKTQAAVASEELPSNLAGAERLLSQHAALKEEIDRYEEDYTKIQAASDLLALEEADVPC
LSLQQWLQKLDVGWNKLLQMWESRREALVQAHIFHLFLRDVQQAEACLRNQASTLAHAEL
PTTMEAAEKAIKKHKDFITTMELSVPKTTLALRAGESLVRQGSPYSERAQEEMAALRDKS
HQNFQLAQEWMQQLNDHLDLQRFLQNCQELAGWMREKRLMAGDQAAKPQARWLRHQEFRA
QLAQNREWLHKIEQEGQQLLEEKPELAGSVKRQLEEIRQCWGELESTAQARAQHLLEASK
AEQLVQSYADLDKRLVNMEGQLQAVDAGTSLATVNNQLKKLQTMESQMEEWYKEAGQLQA
QLASLPLEPASKEAVDEKQNAVGTRIVRLIEPLKERRRILLASKEVHQVCRDLEDEISWV
QDRLPLATLRDHGSNLQAVQHFIKKNQNLRRELQVHQPRVDEVLERAGALASIKSPEVDG
VRLLLEKLRELWGALGEQTEQRQHLLDATYQVEQYYFDVGEVEAWLGEQELLLLNEEKGK
DEQSTLQLLKKHLVLEQSIENYEETIAQLSRQCRALLELGHPDSEQISRRQSQADRLYVS
LKDLVEERKAGLEQQYWLYQLSREVDDLEHWIAEKEVVAGSPELGQDFEHVTLLQEKFTA
FASETGSLGNERLSAVNQMVDELIDYGHVDAATIAEWKDGVNEAWADLLELMETRAQMLA
ASHELHKFFSDCKDLLAQIEEKKQRLPEVAARESRSSAGALQRVLSSFEHDVQVLVSQQV
RQLQEGAAQLRTVYAGENADAIATKEQDVLRAWKELLGSCEACRLQITTTTDKMRFTSMV
RDLISWMDGVSCQIGTGEKPRDVSSVEVLMNYHQGLKSEIEARSQSIAACVELGKTLVLN
RSPVAEEIKGHMERLMTKKKELTDKWDKHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLL
KSRQLGSSVDEVEQLIRRHEAFRKAASTWEERFSSLRRLTTLEKLKAEQSKQPATPLLGR
KFLGEPSEPGLKGPSLLRQAEAKLERQDLLRGRPQAPALPSGGPGEPAEALELRVAYVRQ
EMKPERLQPRLDRVQEGLAVGAERLREAKAAAEERLEAKPSQHLQVPVAGTVLAEPAQVS
HAETQPEQPREQRPEPSEQETLRHEQAERRRERHERRLERQGSSEQETPRHELAERRRER
HERRLERQESSEQETPRHEPKGGGKTTLAEIVEQLQEKESAAQVPAPPRDSPARLPNGID
LLPERTPRPDRPRARDRPKPRRRPRPRDPSQPPGESRRSRSAPAQSSAPPPPPPTYTVQL
EGFLLRKHELEGPNKKASNRSWVNLYCVLSKGDLGFYKDAKGQASGSTHGGEPLVPLHQA
TSQVASDYKKKKNVFKLKTGDGNEFLLQAKDEEEMKNWLQALAASTEEHAEIARWSQALL
TTSSTDEGNPRRESDRRASTSGRKK
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggtttacatgatcgactggatggaggagatgcaggccccgctgctgtcgagggaggtg
gggaagcacctgctggaggtggaggacctgctgcagaagcacgccctgctggaggccgac
gtggctgcccagagcgagcgggtgcaggcgctcaaccaggccgccctgaagttctgcgag
ctggcgggttaccagccctgcgacccccagatcatccgcaaccgcgtgacccacgtgcag
acgtgcctggaagagctgtgccagcgggcggcccagcggcgcacggagctggaggcctcc
cgccacctgtgggccttcttccaggagctggaggaggccgaggcctgggtgcgggagaag
gagcagatcctggcctccaagccatgcggcaaggacctgagcagtgtgctgcagctgagc
gggcagcacaaggtgatgctgggggagctgggcgggcgccgggccctgctgcaccaggcc
atgaagaagggggagcagctggtggccacccagggccccggcgcagcccggctgcaggag
aagctgcgggaggtgcggcagcgctggaagaagctggaggaggtgacggggacgcaccag
cagaagctgcaggaggccttgagcttctaccagttcagcgccgagacggacgacctgctg
gcctggctgcaggacacctaccgcctggcctccagcgacgacttcgggcacgacgagtac
tccagccaggcgctgctccgcaagcacgccgccgtggcgcaggagctggagcggcaccgg
gcgcccgtgctggccctgcgtgcccagctggcccggctggccccccagcaccaccaggtg
gtggacgtgcagatccgcatcgtggaggtggagcagctctacggggaggtggccgaggtg
gccgtgctgcggcaccagtggctgcaggacgccctggccgtgtaccgcatgttcggcgag
gtccgcgcctgcgagggctggctggacgagaaggagcagtggctctccgggatgcacgtg
ccacaggagctggaggacgtagaagtggtgcaacacaggtttgagagcctggaccaggag
atgaacagcgtgatggggcgcatcctggacgtgaatgagaccgtgcagcagctggtggag
ggtggccaccccagcgcgtccgaggtgcagtcctgtcgggaccacctgaacggcaggtgg
aaccgggtggtggagctggtggagcagaggaaggaccatctcagctccgtcctgacgatc
cagaactacctcctggagtgcaccgagatcaaggcgcagatccgggagaagcgccgcgcc
gtggaggccagccagtacagcagcggcgacctgggtggcgtcctggccttgcagcgcaag
ctctccaccatggaggcggccctggtggtgctggagcccaagctcctcgagctgcagcag
gagggcgaagccttggccaccgcccacccggcccaggcgctgaccgtcctgttgcacttc
gaggagatcagcgaggagtgggaggccttgaagaggaccctgcagggctgcgaggactcg
ctctccgtggctagccggctgcagcagttcatccaggacctggacaacttcctgacctgg
ctggtgaagactcaggcggccgtggcctcggaagagctgcccagcaacctggcgggggcg
gagcggctgctgagccagcacgcggccctcaaggaggaaatcgaccgctacgaggaggac
tacaccaagatccaggcggccagcgacctgctggccctggaggaagccgacgtgccctgc
ctctcgctccagcagtggctgcagaagctggacgtgggctggaacaagctgctgcagatg
tgggagagccggcgggaggcgctggtccaggcgcacatcttccaccttttcctgagggac
gtgcagcaggccgaggcctgtctccgcaaccaggcgtccaccctggcccacgcagagctg
cccaccacgatggaggcggcggagaaggccatcaagaagcacaaggatttcataaccacc
atggagctgagcgtgccgaagacgacgctggccctgcgggccggggagagcctggtgcgc
cagggcagcccgtacagcgagcgcgcccaggaggagatggcggcgctcagagacaagagc
caccagaacttccagctggcccaggagtggatgcagcagctgaacgatcacttggatctg
cagcgtttcttgcagaactgtcaggagctcgccggctggatgcgggagaagcggctcatg
gccggggaccaggcggccaagccccaggcgcggtggctgcggcaccaggagttccgggcc
cagctggcgcagaaccgcgagtggctgcacaagatcgagcaggaaggccagcagctcctt
gaggagaagccggagctggccggctcggtgaagaggcagctggaggagatccggcagtgc
tggggggagctcgagagcacggcgcaggccagggcccagcacctcctggaggccagcaag
gcggagcagctggtgcagagctacgcggacctggacaagaggctggtgaacatggagggg
cagctgcaggctgtggatgctggcaccagcctggccaccgtcaacaaccagctgaagaaa
ctccagacgatggagtcgcagatggaggagtggtacaaagaggccgggcagctccaggcg
cagctggcctccctgcccctggagccggccagcaaggaggcggtggacgagaagcagaac
gcggtggggacgcggattgtccgcctcatcgagcccctgaaagagagaaggaggatcctg
ctggcttccaaggaggtgcatcaggtctgccgtgacctggaggacgagatcagctgggtc
caggaccgtctgccgctcgccaccttgcgagaccacgggagcaatctgcaggcagtgcag
cacttcatcaagaagaaccagaacctgcggcgtgagctgcaggtgcaccagccccgggtg
gacgaggtgctggagcgggcgggcgccctcgcctccatcaagagccccgaggtggacggg
gtgcggctgctgctggagaagctgcgggagctgtggggggcgctgggggagcagacggag
cagcgccagcacctgctggacgccacctaccaggtggagcagtattacttcgacgtgggc
gaggtggaggcctggctcggcgagcaggagctgctgctgctgaacgaggagaagggcaag
gacgagcagagcaccctgcagctgctgaagaagcacctggtgctggagcagagcattgag
aactacgaggagaccatcgcccagctgtcccgccagtgccgcgccctgctggagctgggc
caccccgacagcgaacagataagtaggcggcagtctcaggctgaccggctctacgtgtct
ctgaaggacctggtggaggagcgcaaggccgggctggagcagcagtactggctgtaccag
ctcagtcgcgaggtggacgacctggagcactggatcgccgagaaggaggtggtggccggg
tcgccggagctgggccaggacttcgagcacgtcacgctactgcaggagaagttcacggcg
ttcgccagcgagacgggcagcttggggaacgagcggctctcggccgtgaaccaaatggtg
gacgagctgatcgactacgggcacgtggacgcggccaccatcgcggagtggaaggacggg
gtgaacgaggcctgggccgacctgctggagctgatggagacgcgggcccagatgctggct
gcctcccacgagctgcacaagttcttcagcgactgcaaggacctgctggcccagatcgag
gagaagaagcagcggctgccggaggtggcggcccgtgagtcccgcagctccgccggggcc
ctgcagcgggtgctcagctccttcgagcacgacgtgcaggtgctggtgagccagcaggtg
cggcagctgcaggagggggcggcccagctgcgcactgtgtacgccggggagaacgccgat
gccatcgccaccaaggagcaggatgtgctgcgggcgtggaaggagctgctgggctcgtgc
gaagcgtgccggctgcagatcaccaccaccacggacaagatgcgcttcaccagcatggtg
cgcgacctcatctcctggatggatggcgtcagctgccagattggtactggcgagaagccc
agggatgtgtcctcggtggaggtgctgatgaactatcaccagggtctgaagagcgagatc
gaagcccgaagccagagcatcgcggcctgtgtggagctgggcaagaccctagtgctcaac
agaagccccgtggccgaggagatcaagggccacatggagaggctaatgaccaagaagaag
gagctgactgacaagtgggacaagcactgggagtggctgcagcaaatgctggaagtgcac
cagttcgcgcaggaggccgtggtggctgacgcctggctcacggcccaggagcccctgctg
aagagccgacagctcggcagcagcgtggacgaggtggagcagctgatccggcgccacgag
gcctttcgcaaggcggcctccacctgggaggagagattcagctccctgcgccgcctcacc
acgctagagaagctgaaggccgagcagagcaagcagccggccacaccactcctgggacgc
aaattcttgggggagcccagcgagccgggcctcaagggcccctcgctgctgcgccaggcc
gaggcaaagctggagcggcaggacctgctgcggggccggccccaggctccggccctcccc
agcggggggccaggggagcccgcggaggcgctggagctcagggtggcctacgtgcggcag
gagatgaagccggagcggctgcagccccggctcgaccgcgtgcaggagggcctggctgtc
ggcgccgagaggctgagggaggcgaaggcggcagctgaggagaggttggaggccaagcca
agccagcacctgcaagtgcccgtggcaggcacggtgctggcggagccggcccaggtcagc
catgctgagacgcaaccggagcagccgcgggagcagcgtccggagcccagcgagcaggag
acgctgcgccacgagcaggcagagaggcgccgggagcggcacgagcggcgcctggagcgg
caggggtccagcgagcaggagacgccccggcacgagctggcggagagacgccgggagcgg
cacgagcggcgcctggagcggcaggagtccagcgagcaggagacgccccggcacgagccc
aaagggggcggcaagaccacgctggccgagattgtggagcagctgcaggagaaggagtcg
gccgcgcaggtgccggccccgccccgcgactcccccgcccgcctgcccaacggcatcgac
ctgctgcccgagaggacgccgcgcccggaccggccccgggcccgcgacaggcccaagccc
aggaggaggccgcggcccagggaccccagccagcccccaggggagagccgcaggtcccgc
tcggcgccggcccagagcagcgccccgccccctccgccccccacctacaccgtccagctg
gagggcttcctcttacgcaagcacgaactggaggggcccaacaagaaagcctccaacagg
tcctgggtaaacctgtactgtgtcctgagcaaaggggacctgggcttctataaggatgcc
aaggggcaggcgtcgggcagcacccacggtggggagccgctggtccccctgcaccaggcc
actagccaggtggccagtgactacaagaagaagaagaacgtcttcaagctcaagaccggt
gacgggaacgagttcctgctgcaagccaaggacgaggaggagatgaagaactggctccag
gcgctggctgcctccaccgaggagcatgccgagatcgcccgctggagccaggcgctgctc
accacttcctccaccgacgagggcaacccgcggcgggagagcgaccggcgggccagcacc
tccggcaggaagaagtga
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