Trachemys scripta elegans (red-eared slider): 117888623
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Entry
117888623 CDS
T07347
Symbol
PLD3
Name
(RefSeq) 5'-3' exonuclease PLD3 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00564
Glycerophospholipid metabolism
tst00565
Ether lipid metabolism
tst01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
117888623 (PLD3)
00565 Ether lipid metabolism
117888623 (PLD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117888623 (PLD3)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
117888623 (PLD3)
Membrane trafficking [BR:
tst04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
117888623 (PLD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
Motif
Other DBs
NCBI-GeneID:
117888623
NCBI-ProteinID:
XP_034648076
LinkDB
All DBs
Position
16:7691872..7705417
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AA seq
570 aa
AA seq
DB search
MEPGPEVGRLEGGRGSTPGKEGWCLLPTARAVCAAAGAGAKGRGTQPEGAWEPLLLQVCW
FVLLLHHSTLGLRGSGKMKLSVTPKKLNALESREEFLLPRQPNRLSQKYPRRALLAVILV
GVLLAGVLTHLLVFPFGSPLGREKVGQDPDNTCSDPCRIVLVESIPEGMVYEANSTVNPS
TFQAWKNLIGGAKSSLDISSFYWTLTNDDTHTQEATADQGEEILAELLQLPQRGISVRIA
VSSPSSKQPPDDLQALEQSGAAVRKVNMHRLTGGVLHTKFWIVDKTHVYLGSANMDWRSL
TQVKELGAAVYNCSCLAKDLGKMFEAYWVLGVPDASIPSPWPANYSTTYNKETPLEVQLN
GTDASVYLSSSPPALCAEGRTEDLHALLGVIDDASQFVHIAVMSYLPTMEFSHPRRYWPT
IDNHLRKAAYERQVHIRLLIGCWEHSKPAMFPFLKSLAAMQDNRTQYSVEVRLFTVPANE
TQAEIPYARVNHNKYMVTDKVAYIGTSNWSGDYFVRTAGSALVVNQSDTNAQGELTVREQ
LQAVFERDWNSKYSRDISTLGQWEDICRGH
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcccagaggtgggcaggctggagggagggcgaggctccacccctgggaag
gaaggctggtgtctcctccccacggcccgggctgtgtgcgctgctgccggggccggggcg
aagggccgggggacccagccggagggagcgtgggaaccgctgctcctgcaggtttgctgg
ttcgttctcctgctgcatcactcaacactgggcctacgaggttctggaaaaatgaagctc
tctgtaacccccaagaagctgaacgctctcgagagccgggaagagttcctgctgcctagg
cagccgaaccggctttcccagaagtacccgcgccgtgccctgctggctgtgatcctggtg
ggtgtgctcttggccggggttctcactcatctcctagtttttccgttcggatcccctttg
ggaagagagaaagtggggcaggatccagacaacacgtgcagtgacccttgcaggattgtg
ctggtggaaagcatccccgagggaatggtgtacgaagccaacagcacggtgaacccgtcc
acttttcaggcctggaagaacctgatcggaggtgctaagagcagcttggacatctcctct
ttctattggaccctgacaaacgatgacacgcacactcaggaagccacggctgaccaaggt
gaagaaatcctggcagaactgctgcagctaccccagcgaggcatctcggtgagaatcgca
gtcagcagcccgtcctcgaagcagcccccggatgacctgcaagcgctggagcagagcggg
gctgctgtccgcaaagtcaacatgcacaggctgactggcggggtgctgcacaccaagttc
tggatcgttgacaagacccacgtctatctcggcagcgctaacatggactggcgttccctc
acccaggtgaaggagctgggcgcggctgtctacaactgcagctgcttggccaaggactta
gggaagatgtttgaagcctactgggttctgggggtgccggacgcctccattccatcgccc
tggccggccaattactccaccacgtacaacaaggagacgcctctggaggtgcagctgaac
gggacagatgccagcgtgtacctttctagctccccgccagccttgtgtgccgagggacgg
acggaggacctccatgcgctgctcggcgtcatcgacgacgccagccagttcgtgcacatc
gccgtgatgagctacctgccgaccatggagttctcgcaccccaggaggtattggccaact
attgacaatcatctcaggaaagcagcctacgaaaggcaagtccacattcgactgctgatt
ggctgctgggagcactccaagccagccatgtttcctttcctgaaatctctggctgccatg
caggacaacaggacgcagtacagcgtggaagtgaggctcttcaccgttccagccaatgaa
acacaagccgagatcccctacgcgagagtcaaccacaacaagtacatggtcaccgacaag
gtggcctatatcggtacctccaactggtcaggagactattttgtcagaacagcaggatct
gcgcttgtggtgaaccagagcgacacaaatgcccagggcgagctcacagtgcgggaacaa
ctccaggccgtgtttgaacgggactggaactccaaatacagcagggacatcagcaccttg
ggccagtgggaagacatctgcagaggtcactag
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