Trachemys scripta elegans (red-eared slider): 117888679
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Entry
117888679 CDS
T07347
Symbol
GBE1
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst00500
Starch and sucrose metabolism
tst01100
Metabolic pathways
Module
tst_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
117888679 (GBE1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tst04147
]
117888679 (GBE1)
Enzymes [BR:
tst01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
117888679 (GBE1)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117888679 (GBE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
hDGE_amylase
DUF5696
Motif
Other DBs
NCBI-GeneID:
117888679
NCBI-ProteinID:
XP_034648194
LinkDB
All DBs
Position
1:169006181..169306368
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AA seq
688 aa
AA seq
DB search
MAAAVARGVSVPELPRLLARDPYLAPFVPDFQRRYTVFHDRLKNIEENEGGLDTFSKSYK
TFGVNQLVDGGLFCKEWAPGAEAVFLTGDFNGWNPFSHPYKKIDYGKWELFIPPGQDGLS
PVPHGSKLKVVIRSKNGEILYRISPWAKYVARVGTNVNYDWIHWEPPLPYLRKHPQPKKP
KSLRIYESHVGIASPEGKVASYKNFTYNILPKIKDLGYNCVQLMAIMEHAYYASFGYQIT
SFFAASSRYGTPDDLKELIDIAHSLGITVLLDVVHSHASNNSEDGLNKFDGTDSCFFHSG
PRGTHSLWDSRLFDYSNWEVLRFLLSNLRWWIEEYGFDGFRFDGVTSMLYHHHGIGTGFS
GDYHEYFGLHVDEDALVYLIMANHMIHLLHPESITIAEDVSGMPALCCPIAQGGGGFDYR
LAMAIPDKWIQIIKELKDEDWNMGNIVHTLTNRRYEEKYIAYAESHDQALVGDKTLAFRL
MDAEMYTNMSVLSPLTPVIDRGIQLHKMIRLITHALGGEGYLNFMGNEFGHPEWLDFPRI
GNNESYHYARRQFHLADDHILRYRFLNAFDRDMNKLEERFGWLASPPAFVTENHESNKVI
IFERANLIFIFNFHPSKSYTEYRVGAETPGKYKIALDSDAPEYGGHQRLDHNTEYFTEQY
SHNFRSNSLLAYIPSRVAIVLQNMDIPN
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgctgtcgcgcggggcgtgtcggtgccggagctgccgcggctgctggcgcgg
gacccctacctggcccccttcgtgcccgacttccagcgcaggtataccgtgtttcatgac
cgattgaagaacattgaagaaaatgaaggcggccttgatacattttcaaaaagttacaaa
acatttggagtcaatcaacttgtggatggtggactattttgcaaagagtgggctccaggg
gcagaagcagtgtttcttactggcgacttcaatggctggaatccattttctcatccatat
aagaaaattgattatgggaaatgggagctgttcatcccacctggacaagatggattatct
cctgtgccccatggatcaaaattaaaggtggtgatccgtagtaaaaatggagagattctc
taccgtatttcaccttgggcaaaatatgtagcacgcgtaggtaccaatgtgaattacgat
tggatacactgggaaccaccactgccatatctacgtaaacatcctcaaccaaagaaacca
aaaagcttaagaatttatgaatcccacgtgggaattgcttccccagaagggaaagttgct
tcttataaaaactttacatataacattctacctaaaataaaggatcttggatacaattgt
gttcagctgatggctattatggaacatgcttactatgccagttttggttatcaaatcaca
agtttttttgcagcatcaagccgttatggaaccccagatgatctgaaggaattgattgac
attgcccattccttgggaattactgttctattggatgttgtacacagccatgcatcaaat
aactctgaggatggtctgaacaaatttgatggtacagattcctgctttttccattctggt
cctagaggaactcatagtctttgggacagcagactctttgactattcaaattgggaagtt
ctgagattccttctctctaatttgagatggtggatagaagaatatggctttgatggcttc
cggtttgatggtgttacatctatgctatatcaccatcatggaattggtacgggcttcagt
ggagattaccatgaatattttggcctacatgtggatgaagatgccctcgtttatctaata
atggccaaccacatgattcatttattgcatccagaatccataacaatagctgaggatgtt
tctggaatgccagctctttgttgccctattgcccagggaggaggtggatttgattatcgg
ctggccatggcaattccagataaatggatacagataattaaagagttgaaagatgaagac
tggaatatgggcaatatagtgcatacgctgacaaacaggcggtatgaagagaaatacatt
gcatatgcagagagccatgatcaggcccttgttggtgataagacgttggcatttcggctg
atggatgcagagatgtatacaaatatgagtgtactttcaccactcactccggttattgat
cgtggaatacagcttcataaaatgattcgcctcattactcatgcacttggaggagagggc
tatctcaacttcatgggtaatgaatttgggcatccagaatggttagattttcccagaata
ggaaacaacgagagttaccattatgccaggagacagtttcatttagctgatgatcacatt
cttcgctatagattcctaaatgcatttgacagagatatgaataaattggaagaaagattt
ggctggcttgcatctcccccggcttttgtgactgaaaatcatgaatcgaataaggtcatc
atatttgagagggcaaatctaatttttatattcaatttccatccatctaaaagctatact
gaatacagagtgggtgctgaaactccaggaaagtataaaattgcgttggattctgatgca
ccagaatatggaggacatcagagactggaccacaatacagaatacttcactgaacaatat
tcacataattttcgatctaattctcttttggcgtacattccaagcagagtggcgattgtg
ctccagaatatggatatcccgaactga
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