Trachemys scripta elegans (red-eared slider): 117888692
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Entry
117888692 CDS
T07347
Symbol
NFKBIB
Name
(RefSeq) NF-kappa-B inhibitor beta
KO
K02581
NF-kappa-B inhibitor beta
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04621
NOD-like receptor signaling pathway
tst04622
RIG-I-like receptor signaling pathway
tst04623
Cytosolic DNA-sensing pathway
tst04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117888692 (NFKBIB)
04622 RIG-I-like receptor signaling pathway
117888692 (NFKBIB)
04623 Cytosolic DNA-sensing pathway
117888692 (NFKBIB)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117888692 (NFKBIB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tst03000
]
117888692 (NFKBIB)
Transcription factors [BR:
tst03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
117888692 (NFKBIB)
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Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Motif
Other DBs
NCBI-GeneID:
117888692
NCBI-ProteinID:
XP_034648205
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All DBs
Position
16:3089860..3095360
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AA seq
393 aa
AA seq
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MAEPQQRPGPGPGPGPGEAKRPEAGEDWCDSGLGSLSEGQLSQIQEGLGGPHPPTAVPVT
SDPCPGGRPVTSDPGGRPVTSDPGGPKTPDSCGSGSERLDSALGDSLGEDEAGWGAAVGQ
ELGAITQGVEAVRLGETPAVAPEAWLHHVLGFVTEDGDTALHLAVIHEHEAFLDSILQYM
ARTEYLDLQNDLGQTALHIAVILGASNFVRKLMAAGAGLCVQERAGHTALHLACREGWRD
CAQCLLAALSGHWPGKGNDACAQLDCTNYDGYTPLHVAVLRKDLEVVKLLVDAGADLNKA
EMSCGRSPLHLAVESQSPEVVECLLRAGADPRARMNAGYTPIYSAVHRPSQKILQLLREF
GSEEPDWDSEESPADSSDEDYDDIVINSGHYKN
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcggagccgcagcagcggccgggcccggggccggggccggggccgggcgaggccaag
cggccggaggcgggcgaggactggtgcgacagcggcctgggctccctgagcgaggggcag
ctcagccagatccaggagggcctggggggcccgcacccccctactgccgtccccgtgacc
tctgacccctgccccgggggtcgccctgtgacctctgaccccgggggtcgccccgtgacc
tctgaccccggtggccccaagacccccgactcctgcgggtcgggctcggagcgcctggac
tctgccctcggcgactccctgggcgaggacgaagccggctggggggcggccgtggggcag
gagctgggggcgatcacccagggcgtggaggccgtgcggctcggggagacgcccgcggtg
gcccccgaggcctggctgcaccacgtcctgggcttcgtgaccgaggacggggacacagcc
ctccacctggctgtgattcatgagcatgaggcctttctggattctatcctgcagtatatg
gctaggacagaatacttggatctgcagaacgacctgggccagacggcattgcatattgca
gtcatcctcggcgcctccaactttgtccgcaagctgatggcagccggggcggggctctgc
gtgcaggagagagctggccacacagcgctgcacctggcgtgccgggagggctggcgggac
tgcgcacagtgcctcctggcagcgctgagcgggcactggcccggcaaggggaatgacgcc
tgcgctcagttggactgcaccaattatgatggttacacgccgctgcacgtggctgtcctg
cggaaggacctcgaagtggtcaagctccttgtggatgccggagccgatctcaacaaggcg
gagatgagctgcgggcggagtcccctccacttggcagtggagtcgcagagcccggaagtg
gtggagtgcctgctgcgcgccggtgcggacccgagggcccggatgaacgccggttacacc
cccatctatagcgccgtgcacaggcccagccagaagatcttgcagctgctccgggagttc
ggctcggaggagcccgactgggactcggaggagagcccggctgacagcagcgacgaggac
tacgacgacatcgtcatcaacagtggacactataagaactga
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integrated database retrieval system
