Trachemys scripta elegans (red-eared slider): 117888787
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Entry
117888787 CDS
T07347
Symbol
SAMD4B
Name
(RefSeq) protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tst03019
]
117888787 (SAMD4B)
Messenger RNA biogenesis [BR:
tst03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117888787 (SAMD4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
117888787
NCBI-ProteinID:
XP_034648396
LinkDB
All DBs
Position
16:3590763..3611434
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AA seq
686 aa
AA seq
DB search
MMFRDQVGILAGWFKGWNECEQTVALLSLLKRVTRTQARFLQLCLEHSLADCTEIHIVES
EANSAAVISQWHQESKDKVVSLLLSHLPLLQPGNTEAKSEYMKLLQKVLAYSIESNLFIE
ESRQLLSYALIHPATTLDDRNSLALWLNHLEERLSSGYSGQGRGRPDTAYHSRQGSDEWQ
GPGDSGMGELGHGWQEKLPRENGHLPFHSSSSVPSAINSIGSNANAALPCQIHPSPLKRS
MSLIPTSPQAPGEWMSPDELCARQAFIPGDHAPLSPQSSVASSGSEQTEEQMGSRNTFQE
DGSGMKDVPSWLKSLRLHKYAALFSQMTYEEMMTLTEQHLESQNVTKGARHKIALSIQKL
RERQSVLKSLEKDILEGGNLWNALQELQQIIITPIKAYSSLQAMAAPKEGQQAVPERHGA
PRPGLDKATNGAEDKEPAVDGFSSQTASPCDGESATAPIAEGDIPGQFTRVMGKVCTQLL
VSRPDEENITSYLQLIEKCLTHEAFTETQKKRLLSWKQQVLKLLRAFPRKAVLDMQGYRQ
QKGWAFGSNSLPIAGSVGVGVARRGQRPFQMPPRAMPPSRLGLLSPAGIGGVLPRHALTS
PIGSQGRQNLWFANPGGSNSMPGQSRSSVQRTHSLPVHTSPQAIIMFPQDCQIPGTDLEI
NPTLESLCLSMTEHALGDGTDKTSTI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggatcaggtgggaatcctggccggctggttcaaaggctggaatgaatgc
gagcagacggtggctctgctctccctcctcaagcgcgtcactcgcacccaagcccgcttc
ctgcagctgtgcctggagcactcgctggccgactgcaccgagatccacatcgtggagtcg
gaggccaacagcgcagctgtcatcagccaatggcaccaggaatcgaaggacaaggtggtc
tccctgctcctgtctcacctgcccctgctgcagcctggcaacacagaagccaagtccgaa
tacatgaagctattgcagaaggtcctggcctactccatcgagagcaacctgttcatcgag
gaaagccggcagctgctgtcctacgccctcatccacccggccaccacgctggacgatcgc
aactccctggccctgtggctcaaccacctcgaggaacgcctgtctagcggctactccggc
cagggcaggggccggcccgacactgcctaccactcgcgccagggctcggacgagtggcag
ggcccaggggactcgggcatgggggagctgggacacggctggcaggagaagctgccccgc
gaaaacggacacttgcctttccactcctctagctcggtgccctcggccatcaacagcatc
ggaagcaatgcaaatgcagctctgccctgccaaatccaccccagcccgctcaagcgctcc
atgtccctcatccccaccagcccgcaggcccccggcgagtggatgagccccgacgagctt
tgcgcccggcaggcgttcatcccgggggaccacgcgcccctgtccccccagagcagcgtg
gcctcctcgggcagcgaacagacggaggagcagatgggcagccgtaacaccttccaggag
gatggcagtggcatgaaagacgtcccctcgtggctgaagagccttcgtctgcacaagtac
gcagccctcttctcccagatgacgtatgaagagatgatgaccctcacggagcagcatctg
gagtcccagaacgtgaccaaaggagccagacacaaaattgccttgagcatccagaagcta
cgggagaggcagagtgttctcaagtctctggagaaggacatcctagaaggagggaacctg
tggaacgcgctccaggagctccagcagataatcatcacgcccatcaaagcatacagctcc
ctccaggccatggccgcgcccaaggaggggcagcaggcggtgcccgagcgccacggagcc
cccaggccgggcctggacaaagccaccaacggggcagaggacaaggagcctgcagtggac
ggcttctcgtcccagacggcctccccctgcgacggggagtcggccacggcacccatcgcg
gaaggggacatcccggggcagttcacccgggtgatggggaaagtgtgcacgcagctgctc
gtctcccggcctgacgaggagaacatcaccagttacctccagctcatagagaagtgcctg
actcacgaggcattcacggagacgcagaagaagaggctgttgtcctggaagcagcaggtg
ctgaagttgttgcgagcgttcccccggaaggccgtgctcgacatgcaagggtaccgccag
cagaaagggtgggcttttggttccaactctctccccatagctggatctgtgggggtgggc
gtcgcgcgcagagggcagcggccgttccagatgccccctcgagccatgcccccgagccgc
ctggggctgctgagtccggcggggattggaggggtcttgccccggcatgcacttaccagc
cccatcgggagccagggacgacagaatctgtggttcgccaatcccgggggcagcaacagc
atgcccggccagagccgcagctcggtccagcgcacccattcgctacccgtccacacgtcc
ccgcaggccatcatcatgttcccccaggattgccagatccccggaacagacctggagatc
aaccccacgctggagtcgctgtgcctgagcatgacggagcacgcgctgggcgatggcacc
gacaagacctccaccatctga
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