Trachemys scripta elegans (red-eared slider): 117888878
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Entry
117888878 CDS
T07347
Symbol
KRT18
Name
(RefSeq) keratin, type I cytoskeletal 18
KO
K07604
type I keratin, acidic
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
117888878 (KRT18)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tst04812
]
117888878 (KRT18)
04147 Exosome [BR:
tst04147
]
117888878 (KRT18)
Cytoskeleton proteins [BR:
tst04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
117888878 (KRT18)
Exosome [BR:
tst04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
117888878 (KRT18)
Exosomal proteins of other body fluids (saliva and urine)
117888878 (KRT18)
Exosomal proteins of colorectal cancer cells
117888878 (KRT18)
Exosomal proteins of melanoma cells
117888878 (KRT18)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TACC_C
CCDC39
Plectin_PPL
FliJ
DUF2095
Rod_CreS
Nas2_N
Laminin_II
GAS
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
117888878
NCBI-ProteinID:
XP_034648555
LinkDB
All DBs
Position
16:18855737..18862359
Genome browser
AA seq
429 aa
AA seq
DB search
MNYSRSTTYSSGVRGPNIMGRRYAPNSAASVYAGAGGSGSRISVARATSLGSSFPGSSAG
GSYSIALSGSGVVQNEKETMQDLNERLASYLDKVRRLETDNHKLETQIREFMDKKGPSSR
DWSHYFDIIEDLRKQILDSAVDNARIVLQIDNARLAADDFRVKFESELAIRQSVESDING
LRKVLDDTNMSRLQLEGEIESLKEELIFMKKNHQDEVDSLQAQITNSGLTVEVDAAQPQD
LGKVMAEIRAQYDNLAQKNMADLDQQWNQMITQSTVEITQNTKEIEVARSSVSELRRTYQ
TLEIELESLRNLKASLEANLQDVEQRYAMQMEHLNGQLLRAEAELAQIRNDIQRQSEDYQ
ALLNIKDKLEAEIATYRRLLEGGEEFNLNDALVDTGSITQTTHKVVTTTKKTVDGKVVSD
TSESQLFRR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaattactccagatccaccacctactccagcggtgtgagaggcccaaacatcatgggc
aggaggtacgccccaaacagtgctgccagcgtctacgccggagcagggggctctggctcg
aggatctccgtggccagggccaccagcctgggctccagcttccccggcagcagcgccgga
ggcagttacagcatcgccctgtccggctccggggtggtgcagaacgagaaggaaaccatg
caggatctgaacgaacgcctggcctcctacctggacaaggtgcgcagactggaaaccgac
aaccacaagctcgagacccagatccgggagttcatggacaagaagggccccagttcccgg
gactggagccactacttcgacatcatcgaggacctgaggaagcagatcttggacagcgcc
gtggacaatgcccggatcgttctgcagattgacaacgcccgcctggccgccgatgacttc
cgggtcaagttcgagtcggagctggccatccgccagtcggtggagagcgacatcaacggg
ctgcggaaggtcctcgacgacaccaacatgagccggctgcagctggagggagagatcgag
tccctcaaggaggagctgatcttcatgaagaagaaccatcaggatgaggtggacagcctg
caggcccagatcaccaactcagggctgacggtggaagtggacgccgctcagcctcaggac
ctgggcaaggtcatggcggagatccgggctcagtacgacaacctggcgcagaagaacatg
gcggacctggaccagcaatggaaccagatgatcacccagagcaccgtggagatcacccag
aacacaaaggagatcgaggtggcccgcagcagcgtctccgagctgcgccgcacctaccag
acgctggagatcgagctggagtccctgcgcaacctgaaagccagcttggaagcaaacctg
caggacgtggagcagcgctacgccatgcagatggagcatctgaatgggcagctcctgcgg
gctgaggcagagctggctcagatacgcaacgacatccagcgccagtctgaggactaccag
gccctgctgaacatcaaggacaagctggaggcagaaatcgctacctacaggcggctgttg
gagggcggagaggagttcaacctgaacgacgccctggtggacaccggcagcatcacacag
accacccacaaggtcgtcaccacgaccaagaagacggtggatggcaaagtggtgtcggac
accagcgaatcccaattgttcaggcgctga
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