Trachemys scripta elegans (red-eared slider): 117888896
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Entry
117888896 CDS
T07347
Symbol
USP25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tst01002
]
117888896 (USP25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tst04121
]
117888896 (USP25)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117888896 (USP25)
Peptidases and inhibitors [BR:
tst01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117888896 (USP25)
Ubiquitin system [BR:
tst04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117888896 (USP25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UBA_4
CRR7
UIM_2
CUE
Motif
Other DBs
NCBI-GeneID:
117888896
NCBI-ProteinID:
XP_034648579
LinkDB
All DBs
Position
1:174223518..174377978
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AA seq
1118 aa
AA seq
DB search
MTVEQNVLQQSKSQKHQQTFLNQLREITGINDIQVLQQALQDSNGNLELAVTFLTAKNAK
VPQQEEATYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRET
GITDEEQAISRVLEASIAENKASLKRTHPEVWSDSPNPYDRKRQDSCPVGLKNVGNTCWF
SAVIQSLFNLLEFRRLVLNYNPPASAQDLPRNQKEHRNLPFMRELRYLFALLVGSKRKYV
DPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQIKAEEERDGEKPKNPMVELFY
GRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSGKSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNREITRIKRDEIK
RLKEYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPIDDIDASAPLSG
TVTTQTIPSTTEQQGPSSSEIPSTSPVQRSVIHKPFTQSRIPPDLPMHPAPRHITEEELS
VLEGCLHRWRTEVENDTRDLQESISRIHRTIELMYSDKSMVQVPYRLHAVLVHEGQANAG
HYWAYIYDHHQRRWMKYNDISVTKSTWEELERDSFGGYRNASAYCLMYINDKEQFLIQEE
FNKETGQMLLGMDTLPPDLKDYVKEDNKRFEKELEEWDAELAQKVQQEKLLASQTPRMPA
PSSAPVQAGEPEYLEQPSRTDLSKQLKEDSVRAITKALAEQEARSPETVMQTSSDNAPAQ
PAPNQRVVEVAIPDVGTFVIESEEGGYDDEVMLTPNMQGIIMAIGKARNVYDRCGPEAGF
FKAIKLEYARLLKLAQDDPPPECDYRLHHAVVYFMQNEAPKKIIERTLLEQFGDHNLSFD
ERCRNIMKVAQAKLEMIKPDELNMEEYERWHQEYRNYRETTMYLMVGLELFQKKSYMEAL
LYLIYAYQNNKELLSKGLYRGHDEELISHYRRECLLKLNEHAAALFESGDDQEVNNGLII
MNELIVPCLPLLLVDETEEKDIAAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCST
EIKGFNDPPKLPSYSTHELCERFARIMLSLSRTPADGR
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtggagcagaacgtgctgcagcagagcaaatcccagaagcaccagcaaacattt
ttgaatcagctgagggagatcactggtatcaatgacatccaagtactgcaacaggccttg
caggacagcaatgggaacttggaattagcggtgactttccttactgcaaagaatgccaag
gttcctcagcaggaggaagcaacttactatcaaacagcacttccgggcaatgacagatac
atcagtgtgggcagccaggcagacacaaatgtgattgatctcactggagatgataaagat
gatcttcagagggcaattgccctgagtttggaggaatcaaacagggcattcagggagact
ggaataacagatgaggaacaagccattagcagagttctagaagccagtatagcagaaaat
aaagcaagtttgaaaaggacacatccagaagtatggagtgattctccaaacccctatgat
cgaaaaaggcaagacagttgtccggttggattaaagaatgttggcaacacatgctggttt
agtgctgttattcagtcattgtttaacctgctggagtttcgaagactagttttgaactac
aatccacctgcaagtgctcaagatttgccccgaaaccaaaaggaacataggaatttgcct
ttcatgcgtgaattgaggtatctgtttgcacttctcgttggttcaaagagaaaatacgtt
gatccatctagagcagttgaaattcttaaagatgcattcaaatcaaatgattctcagcag
caagatgtgagtgaattcactcataaactattagattggttagaagatgccttccaaatt
aaagctgaagaggagagggatggagaaaagccaaagaacccaatggtagagttgttttat
ggacgatttctagcagtgggtgtgcttgaaggtaagaaatttgaaaacacagaaatgttc
ggccagtacccactccaggttaatggctttaaagatcttcatgagtgcctagaagctgcc
atgattgaaggggagattgaatctttacattcagaaaattctggaaagtctggccaggag
cattggttcactgaacttcctcctgtcttaacttttgagctctcaagatttgagtttaat
caggctttgggaaggccagagaagatccacaacaaattagaatttcctccgattttatat
ctggacagatacatgcacaaaaacagagaaattacaagaattaaacgggatgagatcaaa
agacttaaagagtatctcacagtgttacagcagagattagaacgatatttaagctatggt
tctggtcctaaacgatttcccctggtagatgtcctacagtatgcattggagtttgcatca
agtaaacctgtctgcacttctccgattgatgatattgatgctagtgctccccttagtggt
actgtaacaacacagacgattccaagcacaacagagcaacaggggccttcatcatcagag
ataccaagcacatcgcctgtacaaagatccgtaatacacaaaccattcacacagtcccga
attcctccagacctgccaatgcatccagcaccaagacacatcacggaagaagagctttca
gtgttagaaggctgtttacatcgttggaggactgaagtagaaaatgacactagagacttg
caggaaagcatatctagaatacatcggacaattgaattgatgtactctgacaaatcaatg
gtccaggttccttatcggttacatgctgtactagttcatgaaggccaagctaacgcaggg
cactattgggcatacatttatgaccaccaccagaggagatggatgaaatataatgatatt
tctgtgacaaagtcaacttgggaggagttggaacgtgattctttcggtggttacaggaat
gccagtgcatactgtttaatgtatatcaatgataaggaacaattcttgatacaagaagaa
tttaataaggaaactggtcagatgctgcttggaatggatacgttgcctcctgatttaaag
gactatgtcaaggaagacaataagcgttttgaaaaagagctagaagaatgggatgcagaa
cttgctcagaaagtacaacaggaaaagttgttagcatctcagacacccaggatgccagca
ccctcctctgctccagttcaagccggagaaccagagtatttagagcagccatcaagaact
gatctctcaaagcagttgaaagaagattctgtacgagcaatcactaaagcattagcggaa
caggaagctagaagtcctgaaactgtcatgcaaacgagctctgataacgccccagctcaa
ccagctcctaaccagcgtgttgtagaggtggcgattcctgatgtagggacttttgtgatt
gagtcagaggaggggggttatgacgatgaggtcatgctgaccccgaacatgcaaggtatt
atcatggctataggtaaagccaggaatgtttatgacaggtgtgggccagaagcagggttc
tttaaggcaattaaattggagtatgcacggctactaaaattggctcaggatgatccacca
cccgaatgtgattaccgtttgcatcatgcagttgtctactttatgcaaaacgaggcacca
aagaaaataattgagagaacattactggaacagtttggagatcacaatctgagctttgat
gaaaggtgccgcaacataatgaaagtggctcaagccaaacttgaaatgataaagcctgat
gaactaaacatggaggagtatgagagatggcatcaagaatatagaaattacagagaaaca
accatgtatctcatggtaggattggaactttttcaaaaaaagagttatatggaagccttg
ctttaccttatctatgcttatcagaataacaaagaactcttgtccaaaggcctgtataga
gggcatgatgaagagctgatatcccattacagaagagaatgtttgctaaaactaaatgaa
catgctgcggcactctttgagtctggagatgatcaggaagtaaataatggactgatcatt
atgaatgagcttattgtcccatgtttgccattactactggtggatgaaacagaagaaaag
gatattgctgctgtagaagatatgagaaaccgctggtgttcgtatcttggacaagaaatg
gaacctaacttgcaagaaaagctgacagacttcctgccaaaacttctagattgctctacg
gagattaaaggtttcaatgatccaccaaagttaccttcctattccacacatgaactgtgt
gagcgatttgcccgaatcatgttgtcactcagtcgaactccagcagatggaagataa
DBGET
integrated database retrieval system
