Trachemys scripta elegans (red-eared slider): 117889087
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Entry
117889087 CDS
T07347
Symbol
APEX2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tst03400
]
117889087 (APEX2)
Enzymes [BR:
tst01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
117889087 (APEX2)
DNA repair and recombination proteins [BR:
tst03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
117889087 (APEX2)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Zn_ribbon_GRF
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
117889087
NCBI-ProteinID:
XP_034648802
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All DBs
Position
16:7171189..7173837
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AA seq
460 aa
AA seq
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MVDGYNSYFSFCRTRSGYSGVATFCKDSATPLAAEEGLSGLLARPGEGGAVGCYGDLGAF
THQELKALDSEGRAVITHHRIRTSAEQETTLTVINVYCPRADPQRPDRAAYQASFYRLLQ
GRAEALLRDGGHVVILGDINTSHRPIDHCEPGDPEVFREHPGRRWLDGFLWAPDGQGLFV
DTFRLLHPSQPYAFTCWRIDTGARLTNHGTRIDYVLADRALALAELRDARVLPEVPGSDH
CPVLAELAATFLPAPRCPPLCTRHMPEFAGTQQKLSRFLVRVERGAGAAGGCGTCRGAGA
GPGCSARRGRRLPRGQADLLRYFRAAQGQLGTGTAQNAPGQGGQELDQNASGHGTQEPAQ
DILGQVRQQEPCNGMVPRELTMGQAAGTQPSSTARWRAVLPGPAPPPCCPAHGEPCALRT
VRKPGPNRGRRFYVCARPPGRPNDPRARCDFFRWAGKGCS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtggatggctacaactcctacttcagcttctgccgcacccggagcggctactcaggt
gtggcgaccttctgcaaggacagtgccaccccgctggcggcggaggaggggctctccggg
ctcctggcccggcccggggagggtggcgccgtgggctgttacggagacctaggggccttc
acgcaccaggagctgaaggcgctggacagcgaggggcgtgcggtgatcacccaccaccgc
atacggacgtcggcagaacaggagaccaccctgacggtgatcaatgtgtactgcccccgg
gctgacccccagcgccccgaccgcgctgcctaccaggcatctttctaccggctgctgcag
ggccgggccgaggcgctgctgagagacggtggccacgtcgtgatcttgggggatatcaac
acatcgcatcggcccatcgaccactgtgagccaggggacccggaggtgttccgggagcac
ccaggccggcgctggctggacgggttcctgtgggcgccagacgggcaggggctcttcgtc
gacaccttccgcctcctgcaccccagccagccctacgccttcacctgctggcgcatcgac
accggcgcccggctcaccaaccacggcacacggatagactacgtcctggctgaccgggcc
ctggcgctggccgagctgcgggatgcccgcgtcctgcccgaggtgcccggctctgaccac
tgccccgtgttggctgagctagcggccacctttctgccagcgccccgctgccccccactc
tgcacccgccacatgcccgaattcgccggcacccagcagaagctcagccggttcctggtc
agggtggagcggggagcaggggccgcgggaggctgtgggacgtgtcgaggggcaggggcg
ggaccggggtgctctgcacggagggggagacgcctgcccagggggcaagcggacctgctg
cgctatttcagagccgcacagggccagctggggacaggcacggcccagaatgcaccaggg
cagggcggacaagagttggaccagaatgcctcagggcacgggacacaggaaccggcccag
gatatactggggcaggtcagacaacaggagccctgcaatggcatggtgcccagggagctg
acaatggggcaggcagcgggcacccagcccagcagcacagcccgctggcgcgcggtgctg
cctggcccggctcctccgccctgctgcccagcccacggggagccctgcgccctccgaact
gtccgcaaacccggccccaaccgtgggcggcgtttctatgtctgtgcccggcccccaggg
cgccccaacgacccccgtgcccgctgcgacttcttccgctgggccggcaaggggtgctcg
tga
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