Trachemys scripta elegans (red-eared slider): 117889282
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Entry
117889282 CDS
T07347
Symbol
PTGIR
Name
(RefSeq) prostacyclin receptor
KO
K04263
prostacyclin receptor
Organism
tst
Trachemys scripta elegans (red-eared slider)
Pathway
tst04080
Neuroactive ligand-receptor interaction
tst04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117889282 (PTGIR)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
117889282 (PTGIR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
tst04030
]
117889282 (PTGIR)
G protein-coupled receptors [BR:
tst04030
]
Rhodopsin family
Lipid
Prostacyclin
117889282 (PTGIR)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srx
7TM_GPCR_Srsx
7TM_GPCR_Srw
Ribosomal_S13_N
DUF4013
Srg
Motif
Other DBs
NCBI-GeneID:
117889282
NCBI-ProteinID:
XP_034649121
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Position
16:5178915..5192547
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AA seq
358 aa
AA seq
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MLFLQKRSELSSLEPLADLCANTTQLQEDGSPVMSSLMFSAGVAGNVVALAILGVHRKEL
RTKSSAFCILVTGLAATDLLGTCFLSPVVFVSYARNASLLGLVEGGRGLCQLFAFAMTFF
GLASMLILCAMAVERCLAISHPYFYSQHNGRGWAKLALPAIYVFSALFCCLPFLGVGQHK
QYCPGTWCFVAMATSHPGTTAAFSLTYATLMAFLILAIFLCNGSVIVSLCQMYRKQRARR
GSLGPAQRRRKSWFSQGEEEVDHLVLLALMTIIFVICSLPLTIRAYIGGLAPDNSEKDDM
VAFRFSAFNPILDPWIFILFRKAVFRSLRTLLCWPWAGRRSPEPRRLDSVPFQANFSC
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcctgcagaagcgctcggagctgtcctccctggaacccctggccgacctgtgc
gccaacaccacccagctgcaggaggacggcagcccggtgatgagctccctgatgttctcc
gccggcgtggccggcaacgtggtggcgctggccatcctgggcgtgcaccgcaaggagctg
cgtaccaagtcctcggccttctgcatcctggtgaccggcctggccgccaccgacctgctg
ggcacgtgcttcctcagccccgtggtcttcgtcagctacgcccgcaatgcctccctgctg
ggcctggtggagggcgggcggggcctgtgccagctcttcgcctttgccatgaccttcttc
ggcctcgcctccatgctcatcctctgcgccatggcggtggagcggtgcctggccatcagc
cacccctacttctactcccagcataatgggcgcggctgggccaagctggcgctgccggcc
atctacgtcttcagcgccctcttctgctgcttgcccttcctgggcgtgggacagcacaag
caatactgccccggcacctggtgcttcgtggcgatggcgaccagccatccgggcaccacc
gccgccttctcgctcacctacgccaccctcatggccttcctcatcctcgccatcttcctc
tgcaacggctccgtcatcgtcagcctctgccagatgtaccgtaagcagcgggcccggcgc
gggtccctggggccggcccagcgccgccggaaaagctggttcagccaaggcgaggaagag
gtggatcacttggtcctgctggccctcatgactatcatcttcgtcatctgctccctgccc
ctcacgatccgtgcctacatcggcggcctggccccggacaattctgagaaggatgacatg
gtagcctttcgcttcagcgccttcaaccccatcctggacccctggatcttcatcctgttc
cggaaagccgtcttccgcagcctgcgcaccctgctctgctggccctgggccgggcgccgg
agcccggagccccgcaggctggacagcgtccccttccaggccaacttctcctgctga
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integrated database retrieval system
