Trachemys scripta elegans (red-eared slider): 117889326
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Entry
117889326 CDS
T07347
Symbol
GTF3C5
Name
(RefSeq) general transcription factor 3C polypeptide 5 isoform X1
KO
K15202
general transcription factor 3C polypeptide 5 (transcription factor C subunit 1)
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tst03021
]
117889326 (GTF3C5)
Transcription machinery [BR:
tst03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
117889326 (GTF3C5)
TFIIIC, fungi type
117889326 (GTF3C5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tau95
Tau95_N
Motif
Other DBs
NCBI-GeneID:
117889326
NCBI-ProteinID:
XP_034649186
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All DBs
Position
17:16960550..16974523
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AA seq
511 aa
AA seq
DB search
MAAGGGGERGSAVLELPRGPRLVCVEYPGLVRDVGKMLQTLGGEEGVSRIYADPGKRLEL
YFRPKDPYCHPVCANRFPTSSMLFKVKRKIRRKQLEAEGETQQEVKFEMEVLGVVSTVYK
FQGMSDFQYLAMHSGPESKQISMYDKILMLKPEKEEFFNRELPLYIPPPIFSRLDTPIDY
FYRPDVQHRDGYNNPQVSCENLIGLSRARRPHNAIFVNFDDDDIPTKPLEPAVQTWKKVC
TNPVDKKVEEELRKLFEIRPVWSRNAVKANISVHPDKLKLLLPYLAYYMLTGPWRSLWVR
FGYDPRKHPEAKIYQVLDFRIRCGMKYGYAPSDMPVKAKRSTYNYSLPITIKKPVSHTVS
VQDLKHGLDTSSTSRAKKPASSRYKLKDSIYIFQEGDLPPYRQMFYQLCDLNVDSLQKII
HRNDGMETECTERDGWCLQKTNDDLRDTMSLMIKQIIRSTRPALFSSTSNAEDGKEQLTY
DSGEEEEDEEEDFKPSDGSENEMETEILDYV
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgggggaggcggggagcggggctcggccgtgctggagctgcctcgcggcccg
cggctggtgtgcgtggagtacccgggcctggtgcgcgacgtgggcaagatgctgcagact
ctgggaggagaagagggggtgtcccggatatatgctgaccctggaaaaaggctcgagttg
tacttccgccccaaggatccctactgccatcctgtgtgtgccaaccgcttccctacctct
tccatgctgttcaaggtaaagaggaagattaggaggaagcagctggaagctgaaggagaa
acccaacaggaagtcaagtttgaaatggaagttcttggggttgtctccactgtttacaaa
tttcaaggaatgtctgatttccagtacctggcaatgcattctggacctgaaagcaaacag
atctctatgtatgacaagatcttgatgctcaaaccagaaaaggaggaattcttcaatagg
gaattacccctctacatccccccacctattttttcacgtctggatacccctatagactat
ttctatcggccagatgtacaacaccgggacggctacaacaatccccaggtgtcttgtgag
aacctgattggcctcagcagggcccgtcgaccacacaatgccatctttgtgaactttgat
gatgatgacatcccgactaagccgctagagcctgcagtgcagacctggaagaaagtgtgc
accaatcctgtggataaaaaagtggaggaagagctgagaaagctgtttgagattcgtccc
gtctggtctcggaatgctgtaaaggccaatatcagtgtccatccggacaagcttaaactt
ctgctaccgtatttggcctattatatgctcacaggtccctggagaagtctgtgggttcga
tttgggtatgaccccaggaaacatcccgaagcaaagatttatcaagtcctggacttcaga
attcgctgtggaatgaaatatggttacgcccctagcgacatgcccgtgaaagcaaaacgc
agcacatacaattacagtctgcccatcactatcaaaaaaccagtaagtcacacagtcagt
gtacaggacctaaaacatgggctggacacatcgagtacatccagggcaaaaaaacctgct
tccagcaggtacaaacttaaagactccatctatatcttccaggaaggagatctgcctcca
tatcgacagatgttctatcagctctgtgacttgaacgtggacagcttacagaaaatcatc
catcggaatgatggcatggagacagaatgcacagaacgggatgggtggtgccttcaaaag
accaatgatgatctgagggataccatgtctctgatgataaagcagatcatcagatccaca
agacctgctctgttttcgagtacgtcgaacgctgaagatggcaaagaacagctgacgtac
gactctggggaggaggaggaggatgaagaggaggacttcaagccttctgatgggagcgag
aatgaaatggaaacagagatcctggactatgtgtga
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