Trachemys scripta elegans (red-eared slider): 117889390
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Entry
117889390 CDS
T07347
Symbol
GAPVD1
Name
(RefSeq) GTPase-activating protein and VPS9 domain-containing protein 1 isoform X1
KO
K27566
GTPase-activating protein and VPS9 domain-containing protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117889390 (GAPVD1)
Membrane trafficking [BR:
tst04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
117889390 (GAPVD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
VPS9
DUF5601
DUF5740
Motif
Other DBs
NCBI-GeneID:
117889390
NCBI-ProteinID:
XP_034649382
LinkDB
All DBs
Position
17:24348551..24415245
Genome browser
AA seq
1501 aa
AA seq
DB search
MHSEYCVVLSPSKMVKLDIHTLAHHLKQERLYVNSEKQLIQRLNADVLKTAEKLYHTAWI
SKQQRINLDRLIITSAEASPAECCQHAKVLEDTQFVDGYKQLGFQETAYGEFLNRLRENP
RLIASSLVAGEKLNQDNTHSVIYTVFTSIYGNCIMQEDESYLLQVLRYLIEFELKESDNP
RRLLRRGTCAFSILFKLFSEGLFSAKLFLTATLHEPIMQLLVEDEDHLETDANKLIERFS
PAQQEKLFGEKGTERFKQKVQEMVDSNEAKLVALVNKFIGYLKQNTYCFPHSLRWILSQM
YKTLSCVDRLEGGEVRAMCTDLLLACFICPAVVNPEQYGIISDAPINEVARFNLMQVGRL
LQQLAMTGSEEGDPHMKSNLGKFDKSCVAAFLDVVISGRAVETPPMSSVNLLEGLSRTVV
YMTYSQLINLVGFMRNVMSSDQLKEDRMALENLLANLPQNKPGKSSSLEMTPYNTPQLSP
ATTPANKKNRLPIGQQLAAITAWDTSTTNLSAHINLVTPFATRSRNRSNIPMDQHGDHEG
SSQDSIQEVQPEEVLVISLGTGPQLTPGMMSENEVLNMQLADGGQGDVPVDETKLHGKPD
KTLRFSLCSDNLEGISEGPSNRSNSVSSLDLEGESVSELGAGPSGSNGVEALQLLEHEQA
TTQDNLDDKLRKFEIRDMMGLTDDRDISETVSETWSTDVLGSDFDPNIDEDRLQEIAGAA
AENMLGSLLCLPGSGSVLLDPCTGSTISETTSEAWSVEVLPSDSEAPDLKQEERLQELES
CSGLGSTSDDTDVREVSSRPSTPGLSVVSGISATSEDIPNKIEDLRSECSSDFGGKDSVT
SPDMDETAHGASQLTSPPSQSDSLLALFDPLSSHEGVSAVVRPKVHYARPAHPPPDPPIL
EGAMGGNEARLPNFGSHILIPTDLEAFKQRHSYPERLVRSRSSDIVSSVRRPMSDPGWNR
RPGNEERELPTQTPNIGAAASVPAPQSSSSSPSKDSSRGEIEERKDSDDEKSDRNKPWWR
KRFVSAMPKAPIPFRKKEKQEKDKDDFVSERFSTLQDDPNPRLSAQAQAAEDILDKYRNA
IKRTSPSEGAIVNYESADVIGDGESIHDSPRDEALQNMSADDLPDSASQVAQPQDSAFSY
RDAKKKLRLALCSADSIAFPMLTHSTRNGLPDHTDPDDNEIVCFLKVQLAEAINLQDKNL
MAQLQETMRCVSRFDNRTCRKLLASIAEDYRKRAPYIAYLTRCRQGLQTTQAHLERLLQR
VLRDKEVANRYFTTVCVRLLLESKEKKIREFIQDFQKLTAADDKTAQVEDFLQFLYGAMA
QDVIWQNASEEQLQDAQLAIERSVMNRIFKLSFYPNQDGDILRDQVLHEHIQRLSKVVTA
NHRALQIPEVYLREAPWPSAQSEIRTISAYKTPRDKVQCILRMCSTIMNLLSLANEDSVP
GADDFVPVLVFVLIKANPPCLLSTVQYISSFYANCLTGEESYWWMQFTAAVEFIKTIDDR
K
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgagtactgtgtggtcctctcaccctcaaagatggtgaagctggatattcac
actctggctcatcacctcaagcaggaacggctctatgtaaactcagaaaagcaacttatt
cagagattaaatgcagatgtattgaagacagctgagaaactgtaccacacagcgtggatt
tccaagcagcaaaggattaacttggacagacttatcataacaagtgccgaagcttctcct
gctgaatgctgccagcatgccaaagtcttggaggacacacagtttgttgatgggtacaag
cagttgggatttcaagagactgcttatggagaattcctcaacaggttgagagagaaccct
aggcttattgcttcctctctggttgctggagagaaactcaaccaggacaacacacacagt
gttatttacacagtctttacctccatctatggcaattgcatcatgcaggaagatgagagc
tacctccttcaagttttgcgttacttgatagaatttgaactaaaggaaagcgacaatccc
agacggcttttgaggagaggcacctgtgcattcagcattttattcaaacttttttctgaa
ggactcttttctgcaaaactcttcctcactgcaacattgcatgagccaatcatgcagctg
ctggtggaagatgaagaccacctagaaacagatgcaaacaaattgattgagaggttctct
cccgcacaacaggaaaaactctttggggagaaaggcactgaaaggttcaaacaaaaagtc
caagaaatggtggattccaatgaggctaagttagtggctttggtgaacaaattcattggt
tatctcaagcagaatacatactgctttccgcatagcttgagatggattttatcacaaatg
tacaaaacactctcctgtgtagaccggctggagggtggggaggtgcgagcaatgtgcaca
gatcttctgcttgcatgtttcatttgtcctgcagttgtcaacccagaacagtatggaata
atttccgatgccccaataaacgaggtggcaagatttaatctgatgcaggtcgggagactt
ttgcagcagttggcaatgacaggctctgaagagggagatccgcacatgaagagcaacctt
ggcaaattcgacaaaagctgtgttgctgctttcctggatgttgttattagtgggcgtgct
gtggaaacccctccgatgtcttcagttaaccttctagaagggttgagtaggactgtggtt
tatatgacatacagccaacttattaatctggttggttttatgcgaaatgtaatgtcaagt
gaccaactgaaggaagatcggatggctctggaaaacttgttggcaaacttaccccagaac
aaacccgggaaaagtagcagccttgaaatgactccttacaataccccacaactctcccct
gcaactaccccagctaacaaaaaaaatcgactgcctataggacaacagttggcagccatt
actgcctgggatacttctaccaccaatctctcagctcacattaatctagtaaccccattt
gctacccgtagcagaaacagatcaaatattccgatggaccagcatggagaccatgaagga
tcctcccaggattctatacaggaagttcagccagaagaagtactggttatttctttggga
acaggtccgcagcttactccggggatgatgtcagaaaatgaggtcttaaacatgcagctt
gccgatggaggacaaggagatgtccctgttgatgaaaccaaactccacggtaaacctgat
aaaaccttgcgcttttccctctgcagtgataatctggaaggaatatctgaaggtccttca
aatcgctccaattctgtgtcctctttggatttagaaggagagtctgtgtcagagcttggt
gcagggccttctgggagcaatggtgttgaagccctgcagctgttagaacatgaacaagct
acgacccaggataatcttgatgacaagctccgtaaatttgaaattcgtgatatgatggga
ttgactgatgatagggacatatcagaaactgtgagtgagacctggagcacagatgtcttg
ggcagtgactttgatccaaatattgatgaagaccgtttgcaagaaattgcaggtgcagct
gcagagaacatgcttggcagcttgctgtgtttgccaggttcaggatctgtgctgctggac
ccctgcacagggtcaaccatctccgaaaccaccagtgaagcttggagtgtggaggtattg
ccaagtgattcagaggccccagacctaaagcaggaggaaagactgcaggagctggaaagc
tgttctgggctgggcagcacctctgatgacacagatgtgagggaggtcagttctcgtccc
agtacaccaggcctcagcgtcgtgtcaggtattagtgcaacctctgaggatattcctaat
aagatcgaggaccttaggtctgagtgtagctctgactttggagggaaagattcagtgaca
agtcctgatatggatgaaacagctcatggagccagtcagttgacttctcccccttctcag
tcggactctttgcttgcattgtttgaccctttgtcatcacacgaaggtgtatcagcagtg
gttaggcctaaagtgcactatgcaagacccgctcatccgccgccagatcccccaatcttg
gaaggagctatgggaggtaatgaggccagattaccaaattttggctcccacatcttaatc
ccaactgatttggaggcgttcaaacaaaggcattcctacccagaaaggctggtccgcagc
aggagctctgacatagtgtcatcagttcggagacctatgagtgaccctggctggaatagg
cggcctggtaatgaagaaagggagcttcctacacaaacacccaacattggggcagctgct
tcagtgcctgcgcctcagtcctcttcgtcatcccccagtaaagactcctctagaggagag
attgaggaacgaaaagatagtgatgatgagaaatctgacaggaacaaaccctggtggaga
aagcgtttcgtttctgccatgcccaaagctcctataccatttagaaaaaaagaaaaacaa
gaaaaagacaaagatgactttgtgtctgagagattctcaacacttcaagatgatcccaat
cccagactaagtgcacaggcacaggctgcagaggatatcctggacaaatataggaatgct
attaagcgaaccagcccaagtgaaggagctatagtaaattatgaaagtgcagatgtaatt
ggagatggtgagagtatacacgactctccacgtgatgaagccctgcagaatatgtcagct
gatgacctcccagattctgcaagtcaagtagcacagccacaagactctgctttctcttac
agggatgcaaagaagaaactgagactggctctttgttcagcagattccattgccttccca
atgttgacccattcgacaagaaatggcctaccagatcacaccgaccctgatgataatgaa
attgtgtgcttcctgaaagttcagttagctgaagctattaacctacaagataagaatttg
atggcccaactgcaggagacaatgcgctgtgtaagccgctttgataaccgaacatgtcga
aagctactggcttccattgcagaggattataggaaaagggctccatatattgcttattta
acccgatgtcgccaaggtctgcagaccacacaagcccatctggaaaggctcctgcagagg
gtattacgtgataaggaagtggccaacagatatttcaccacagtttgtgtgaggttactt
ctggaaagcaaagaaaaaaagataagggaattcattcaagatttccagaaactcactgca
gcagacgataaaacagcccaagtagaagactttcttcagtttttatatggggccatggcc
caggatgtcatctggcaaaatgccagcgaagagcagctccaggacgcacagcttgccatc
gaacgcagtgtgatgaatcgcattttcaaactctcattctacccgaatcaggatggagac
attttgcgtgaccaggtccttcacgagcatatccaaaggttgtctaaggtagtgactgca
aaccaccgagcacttcagataccagaggtgtatcttcgggaggcaccatggccatctgca
cagtccgaaatccgcacaatcagcgcttacaaaaccccacgggacaaagtgcagtgtatt
ctgcgaatgtgttcaaccatcatgaacctgctgagtttggccaatgaagattcagtccct
ggggcagatgactttgttcctgttttggtgtttgttctgataaaggcaaacccaccctgc
ttgttgtccactgttcagtacattagtagcttctatgctaactgtttaactggagaagaa
tcttactggtggatgcagttcacagcagcagttgaatttattaaaaccattgatgatcgt
aagtga
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integrated database retrieval system
