Trachemys scripta elegans (red-eared slider): 117889548
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Entry
117889548 CDS
T07347
Symbol
RABGAP1
Name
(RefSeq) rab GTPase-activating protein 1
KO
K20284
Rab GTPase-activating protein 1
Organism
tst
Trachemys scripta elegans (red-eared slider)
Brite
KEGG Orthology (KO) [BR:
tst00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tst04131
]
117889548 (RABGAP1)
Membrane trafficking [BR:
tst04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
117889548 (RABGAP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
DUF3694
PID
PTB
UPF0242
ERM_helical
Motif
Other DBs
NCBI-GeneID:
117889548
NCBI-ProteinID:
XP_034649808
LinkDB
All DBs
Position
17:22530783..22644042
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AA seq
1069 aa
AA seq
DB search
MDDKVSVGKISVSSDSVSTLNSEDFVLVSRQGDETPSTNNGSDDEKTGLKIVGNGSEQQL
QKELEDILMDPPMEDLSSDREHGEESRTDREGEDPILLEASASSTINPVSMTGLQKPEMS
LPVKPTQGDCEESSPFTPVADEDSVVFSKLTYLGCASVNAPRSEVEALRMMSILRSQCQI
SLDVTLSVPNVSEGTVRLLDPQTHTEIANYPIYKILFCVRGHDGTPESDCFAFTESHYNA
ELFRIHVFRCEIQEAVSRILYSFATAFRRSAKQTPLSATEAPQTPDSDIFTFSVSLEIKE
DDGKGYFSAVPKDKDRQCFKLRQGIDKKIVIYVQQTTNKELAIERCFGLLLSPGKDVRSG
DMHLLDLESMGKSSDGKSYVITGSWNPKSPHFQIVNEETPKDKVLFMTTAVDLVITEVQE
PVRFLLETKVRVCSPNERLFWPFSKRSSTENFFLKLKQMKQKDRKNNTDTLYEVVCLESE
SERERRKTTASPSIRLPQSGSQGSMIPSPPEDDEEEDNDEPLLSGSGDVSKECAEKILET
WGDLLSKWHLNLSVRPKPLSALVRSGVPEALRGEVWQLLAGCHNNDHLVEKYRILITKES
PQDSAITRDINRTFPAHDYFKDTGGDGQDSLYKICKAYSVYDEEIGYCQGQSFLAAVLLL
HMPEEQAFSVLVKIMFDYGLRELFKQNFEDLHCKFYQLERLMQECIPDLYNHFLDISLEA
HMYASQWFLTLFTAKFPLYMVFHIIDLLLCEGISVIFNVALGLLKTTKDDLLLTDFEGAL
KFFRVQLPKRYRSEENAKKLMELACNMKIGQKKLKKYEKEYHTMREQQAQQEDPIERFER
ENRRLQEANMRLEQENDDLAHELVTSKIALRKDLDNAEEKADALNKELLMTKQKLIDAEE
EKRRLEEESAQLKEMCRRELDKAESEIKKNSSIIGDYKQICSQLSERLEKQQTANKAEME
KIRQKVDDCEHCREFFNKEGRVKVASSAKEASDEDTDEEKESLKNQLREMELELAQTKLQ
LVEAECKIQDLEHHLGLALNEVQAAKKTWFNRTISSIKTVTGVQGKETC
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggatgacaaggtctctgttggaaaaatcagtgtctcttcagactcggtatccactctt
aacagtgaagattttgtcttggtttccaggcaaggggatgaaacaccatctacaaataat
ggtagtgatgatgaaaaaacaggactgaagattgtagggaatgggagtgagcagcagctg
cagaaagaacttgaagatatactgatggatccacccatggaagacctgtccagtgaccgg
gaacatggggaagaaagcaggactgacagagaaggggaagatcccatccttcttgaggct
tcggcatcctctaccattaacccggtgtcgatgacaggactccagaaacctgagatgagc
ctgccagtgaaaccgacacagggagattgtgaggagtcgagcccttttacaccagtggca
gatgaggacagtgtggtgttcagcaagcttacctacttgggctgcgcctcagtgaacgcc
cccaggagcgaagtggaagccctgagaatgatgtctatcttacgaagccagtgccagatt
tctttagatgtgaccctgtcagtgcctaatgtgtctgaaggaaccgtgaggctcttagat
cctcaaacacacacagaaatagcaaattatccaatctataaaattctcttctgtgtgcga
gggcatgatgggactcccgagagtgactgctttgctttcactgaaagccactacaatgca
gaactgttcaggattcatgtcttccgatgtgaaattcaagaagctgtgagtcgaatactg
tacagttttgccactgccttccgccgttctgccaaacagactccactctcagccactgaa
gccccacagactccagacagcgatattttcacattctctgtatccctggaaatcaaggaa
gatgatgggaaaggttatttcagtgcagttcccaaagacaaggacagacaatgctttaag
ctccgccaaggcattgataagaagattgtgatttacgtccaacagacaactaataaagaa
cttgccattgagagatgttttggcctcctcctgagccctgggaaggatgttcggagcggt
gacatgcaccttttagatttggagtccatgggcaaaagctctgatgggaaatcgtatgtc
atcactgggagttggaatccaaaatctccacatttccagattgtaaatgaagaaactcct
aaagataaagtgctattcatgactacagctgttgatttggtgataactgaggttcaggaa
cctgtccgattccttctggagaccaaagtccgcgtttgctcacctaatgagagattgttc
tggccctttagcaaacgtagctccactgaaaactttttcctaaaactaaaacagatgaaa
caaaaggacaggaagaacaacacagatacgttatatgaagttgtgtgtctagaaagtgaa
tcagaaagagagagaagaaaaactacagcaagcccctctattcgattgccgcagtctggg
tcccagggctcaatgattccttcccctccagaggatgacgaagaggaagataatgacgag
cctctcttgagtggttctggagatgtttccaaggagtgtgctgaaaaaattcttgaaaca
tggggagatcttctgtccaaatggcatctcaatttgagtgtgaggccaaagcctttgtca
gcgttggtgagaagtggtgttcccgaggcactgagaggagaggtgtggcagctgctagca
ggatgtcataacaatgaccacctcgtggaaaagtaccgaattctcatcacaaaagagtct
ccccaggacagcgcaatcactcgggacatcaatcgcacgttcccagctcatgattacttt
aaggataccgggggagatggccaggactccttgtacaaaatatgcaaggcctattccgtc
tatgatgaagagattggctattgccaaggccagtcatttcttgccgctgtgctgcttctg
catatgcctgaagagcaggcgttcagtgttctggtcaaaatcatgtttgactatggactc
agggaacttttcaaacaaaactttgaagatttgcactgcaagttttatcagttggagcgc
ctcatgcaggagtgcattcctgacctctacaaccactttctggacatcagccttgaagcc
cacatgtatgcctcccagtggtttctaaccctattcactgcaaaattccccctctacatg
gtcttccatattattgacttgctattatgtgagggaataagtgttatttttaatgttgca
ttgggattattaaaaactaccaaggatgacctgttattgacggactttgaaggggcttta
aagttcttccgtgtacagctgcccaagagatatcggtcagaggaaaatgcaaaaaagctg
atggagttagcttgcaatatgaagattggtcagaagaagttgaagaaatatgaaaaggaa
tatcataccatgagagagcaacaagcacaacaggaggatcctatagaaagatttgagcga
gagaaccggcgactgcaagaagcaaatatgaggcttgaacaagaaaatgatgatcttgcc
catgaactggtcaccagcaagattgcactgcggaaggatttagataatgcagaggaaaag
gcggatgcgctgaataaggaattgctaatgaccaaacagaagttaattgatgcagaagaa
gaaaaaaggcgactagaagaggagtctgctcagctgaaggaaatgtgtcgtagggaacta
gacaaggcagagtcggagattaaaaagaatagctctattattggtgactataaacagatt
tgctcccagctgagcgagcgactggagaagcaacaaacagcaaataaagctgaaatggag
aaaatacggcaaaaagtggatgactgtgaacactgccgagagttcttcaataaagaagga
cgtgtgaaggtcgccagctctgccaaggaggcttctgatgaggacacagatgaggaaaag
gagagtctgaaaaaccagctgagggaaatggagcttgagctggcccaaaccaaactgcag
ttagtcgaagcagagtgtaaaatacaggatctggagcaccatttgggcctggcgctgaat
gaggtacaagcagcaaagaagacttggttcaacagaacaataagttctataaaaacagtg
actggtgtccaagggaaagagacttgttga
DBGET
integrated database retrieval system
