Treponema succinifaciens: Tresu_0019
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Entry
Tresu_0019 CDS
T01461
Name
(GenBank) Diaminopimelate epimerase
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
tsu
Treponema succinifaciens
Pathway
tsu00220
Arginine biosynthesis
tsu00240
Pyrimidine metabolism
tsu00250
Alanine, aspartate and glutamate metabolism
tsu01100
Metabolic pathways
tsu01110
Biosynthesis of secondary metabolites
tsu01240
Biosynthesis of cofactors
Module
tsu_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Tresu_0019
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Tresu_0019
00220 Arginine biosynthesis
Tresu_0019
Enzymes [BR:
tsu01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Tresu_0019
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
DAP_epimerase
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp
GARS_A
NBD_C
Motif
Other DBs
NCBI-ProteinID:
AEB12989
UniProt:
F2NU25
LinkDB
All DBs
Position
16260..20495
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AA seq
1411 aa
AA seq
DB search
MPLNKDIHKVMVIGSGPIIIGQAAEFDYAGSQACKALKEQGLEVVLVNSNPATLMTDHTM
ADQIYIEPLIPETIQRIIEKEKPDSLLSTLGGQTGLTLSMELAKSGFLENHGVKLLGAKP
ETIDKAEDRQMFKDTMLAIGEPCIPSKVVTTYEDALDFVKNEIGYPAIIRPAFTLGGTGG
GIVHNDEEMDEIAHNGLHRSPIHQILVEKCISGWKEIEFEVMRDSAGNVLTVCSMENFDP
VGVHTGDSIVIAPTVTLSDKEYQMLRSAALNIISSLGMEGGCNCQFALNPNSFEYAVIEV
NPRVSRSSALASKATGYPIAKVATLIAIGYTLDEIPNAVTKKTAACFEPVLDYVVVKMPK
FPFDKFVYAKRDLGTQMKATGEVMAIGQTFEQAIMKAVRGAEVGAQSLNLSSFVEMSDEE
IEKRVGECTDQRIFAIFQAIKRNILSIIQINKITKIDLWFLAKLENLAFMERDFAKVKAG
EKEFTPELYKAAKNAGYPDKVIQELAGQKITGASGILSEAKEAAKLVKQGKVAHIPAVYK
MVDTCAGEFNAETPYFYGTYDSQNEARIFLDERKEKGKKSSKGTIIVLGSGPIRIGQGIE
FDYASVQCVWALKRLGYDVVTINNNPETVSTDFDTSDRLYFEPLTPEDVMSVVNTEKPVG
VVVAFGGQTAIKLTKFLDSQGIRILGTSADSIDLAEDRERFEELCEKLHINRPKGLTIFT
EEEALEATQKLGYPVLLRPSYVLGGQNMIIAFNDDDVKEYMKIILAQGIENPVLIDQYMM
GTELEVDAICDGKDILIPGIMEHIERTGIHSGDSIAVYPSWNLNDILREKIINQSRELAL
ALGTKGLVNIQYLIYNNDLYIIEVNPRSSRTVPYISKVTNVPMVDLAVRAMLGEKVKNMG
FGTGLYRLPPYFAVKVPVFSFEKLMDVDTHLGPEMKSTGEVLGIASTMEEAIFKGLIGAG
YNMKRSGGVLFSVRKTDRYELPDLAKKFYDMGFKLYATEGNAKTISDFGMEVEVVNKIHE
NPNDNLLSLLDSGKVDYVISTSAKGRDPRADSVRMRRHAVERDIPCLTAIDTANAIANCL
KSKYTAENVELVDINQLREEKQKITFYKMDSTGNDFIVINAMNQVVKNPAGLAVRLCDRR
NGGIGADSLVLIEESKIADAKMRFFNLDGTEGKMAGNAIRCVGKYLYDNNIKGIQEKHGK
KTDATEKITIETGSGVKTLVLYKQNGKVTSVTVDMGKPLFASEEIPTSLVAVDITNCGFN
EENKNAVLPKKAVVNAPLIVAGNEYRVTCINVGNPHCVVFSKFVDKEPVTKIGPLFESHL
VFPEKTNTEFVRVVGPNELKMRTWERGNGETLACGTGACAAAVASVINGFSPINQDITVK
VRGGNLIVKYTGETVLLTGNTKMCYQGEVEI
NT seq
4236 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttaacaaagacattcacaaagttatggttattggatccggccctattattata
ggtcaggctgcggaatttgactatgcgggaagccaggcttgcaaggctttaaaggaacag
ggacttgaagttgttcttgtgaattcaaatcctgcgaccttgatgacagatcatacaatg
gctgaccagatttacattgagcctttgattcctgaaacaattcagcgtattatagaaaaa
gaaaaaccggattcccttctttcaactttgggaggccagacaggtcttactttgagcatg
gagcttgccaagtctggattccttgaaaatcacggggtaaagcttttgggtgcaaagccg
gaaactattgacaaggcagaagaccgccagatgttcaaggacacaatgcttgcgattgga
gagccttgtattccgtctaaagtcgttacaacttatgaagatgcccttgattttgtaaag
aatgaaatcggctatcctgcaattatccgtccagcatttactttgggaggaactggcggc
ggaattgtccataatgatgaggaaatggatgaaattgcccataacggacttcatcgctcc
cctattcatcagattcttgttgaaaaatgtatttccggctggaaagaaatagaatttgaa
gttatgagagacagcgcgggaaatgttcttactgtctgctctatggaaaattttgatccg
gttggtgttcatacaggagattccattgtaattgctccgactgtaactttgagcgacaag
gaatatcagatgcttcgttctgcggcattgaatattatttctagtcttggaatggaaggc
ggatgcaactgccagtttgcattgaatccaaattcgtttgagtatgctgtaattgaagta
aatcctcgtgtaagccgttcttctgcccttgcttcaaaagctactggctaccctattgca
aaagtcgccacattgattgcgattggctatacgcttgatgaaattccgaacgcagtaaca
aagaaaactgctgcttgctttgagccggttttggattacgttgttgtaaaaatgcctaag
tttccgtttgacaaatttgtttatgcaaaacgcgatttgggaactcagatgaaggcaact
ggcgaagttatggctattgggcagacttttgagcaggccattatgaaggcagtccgcgga
gcagaagttggcgcgcaaagcctgaacctttcgtcttttgttgaaatgagtgatgaagaa
attgaaaaacgtgttggcgaatgcacagatcaacgaatttttgcgatttttcaggcaata
aaacgaaatattctttcaataattcagattaataagattacaaaaattgacttgtggttt
cttgctaagcttgaaaatttagcttttatggaaagagattttgcaaaagtcaaagctgga
gaaaaggaatttactccggaactttataaagctgcaaaaaatgccggctatccagataaa
gttattcaggaacttgcaggacaaaaaataacaggagcctctggaattctttcggaagca
aaagaagctgcaaaacttgtaaagcaaggaaaagttgcccatattcctgctgtctataaa
atggttgatacttgcgctggagaattcaatgcggaaactccatatttttatggaacttac
gattcccagaatgaagcccgtattttccttgatgagcgcaaagaaaaaggaaagaaatct
tcaaagggaacaattattgttttaggttcaggtccgattagaattggtcagggaattgaa
tttgattatgcttctgttcaatgcgtttgggctttaaaacggcttggctacgatgttgtt
acaatcaacaataacccggaaactgtttctactgactttgatacaagcgaccgtctttac
tttgagcctcttactccagaagatgttatgagcgttgtcaacacagaaaagccagttgga
gttgttgttgcttttggcggacaaactgcgattaaacttacaaaatttcttgattctcag
ggaattcgcattttgggaacaagcgcggattcgattgaccttgcggaagaccgcgagcgt
tttgaagagctttgtgaaaaacttcatataaaccgaccaaagggacttacaatttttaca
gaagaagaggctttggaagcaacacagaaacttggctaccctgttcttttgcgtccgtct
tatgttcttggcggtcaaaacatgattattgcctttaacgatgacgatgtaaaggaatac
atgaagattattcttgcccagggaattgaaaatccggttttgattgaccagtatatgatg
ggcacagagcttgaagttgatgcgatttgtgacggaaaagacattcttattccgggaata
atggagcatatcgagcgtacaggaattcattcgggagattcaattgcggtttatccaagc
tggaatttaaatgatattctgcgtgaaaaaattataaatcagtccagagaacttgctttg
gctcttggaacaaaaggtcttgtaaatattcagtatcttatttacaacaacgatttgtat
attattgaagtgaatccgcgttcaagccgcacagttccttacatttcaaaagttacaaat
gttcctatggttgatttggctgtgcgcgcaatgcttggagaaaaagtaaagaatatggga
tttggaactggactttatcgtttgcctccgtattttgctgtaaaagttcctgttttcagc
tttgaaaaactgatggacgttgatactcatcttggtcctgaaatgaagtccactggtgaa
gttttgggaattgcatctacaatggaagaggctattttcaaaggcttgattggtgcagga
tacaatatgaaaagaagcggcggagttttgttcagcgtaagaaaaacagaccgttatgag
cttccagacttggcaaaaaaattctatgacatgggatttaagctttatgccacagaagga
aatgcaaagacaatcagcgattttggaatggaagttgaagttgtaaataaaatccatgaa
aatccaaatgataatcttttgtctttgcttgattctggaaaagttgactacgtgatttcg
acttctgcaaaaggaagggatccgcgggcagattctgtccgtatgagacgccatgctgtt
gagcgcgacattccgtgtcttactgcgattgatacggcaaatgccattgcaaactgcctc
aagtcaaagtatacggctgaaaatgttgaacttgtggatataaatcagcttagggaagaa
aagcaaaaaattactttctacaagatggattcaactggaaacgactttattgttataaat
gcaatgaatcaggttgtaaaaaatcctgcgggtcttgcggttcgtctttgtgacagacgg
aatggcggaattggagcggattctcttgttcttattgaagaaagcaaaattgctgatgca
aagatgcgcttttttaatcttgacggaacagaaggaaaaatggcgggaaatgcaatccgc
tgtgtgggaaaatatctttacgataacaatataaaaggaattcaggaaaagcacggaaag
aaaaccgatgcgactgaaaaaatcacaattgaaactggcagcggagtaaaaactttagtt
ttgtacaagcagaacggaaaagttacttctgttactgttgacatgggaaaacctcttttt
gcaagtgaagaaattcctacttctttggttgctgttgatattacaaattgcggctttaat
gaggaaaataaaaatgctgttcttccaaagaaagccgttgtcaatgcgcctttgattgtt
gcaggaaacgaatacagagttacttgcataaatgtcggaaatcctcactgtgttgttttc
agcaaatttgtggacaaagagcctgtcacaaaaattggacctttgtttgaaagccattta
gttttcccggaaaaaacgaatacagaatttgtgcgcgttgtcggtccgaatgaacttaag
atgcgtacttgggagcgcggaaacggagaaactttggcttgcggaactggagcttgtgcg
gcggcagttgcttctgttataaatggattttctccaataaatcaggatataactgtaaaa
gtccgtggcggaaatcttattgtaaaatatacaggcgaaactgtcttgttaacaggaaat
acaaagatgtgctatcaaggcgaagttgaaatatag
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