Treponema succinifaciens: Tresu_0447
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Entry
Tresu_0447 CDS
T01461
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tsu
Treponema succinifaciens
Pathway
tsu03030
DNA replication
tsu03410
Base excision repair
tsu03420
Nucleotide excision repair
tsu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tresu_0447
03410 Base excision repair
Tresu_0447
03420 Nucleotide excision repair
Tresu_0447
03440 Homologous recombination
Tresu_0447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tsu03032
]
Tresu_0447
03400 DNA repair and recombination proteins [BR:
tsu03400
]
Tresu_0447
Enzymes [BR:
tsu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tresu_0447
DNA replication proteins [BR:
tsu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tresu_0447
DNA repair and recombination proteins [BR:
tsu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tresu_0447
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tresu_0447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
Polysacc_deac_2
Motif
Other DBs
NCBI-ProteinID:
AEB13399
UniProt:
F2NXS9
LinkDB
All DBs
Position
488686..491475
Genome browser
AA seq
929 aa
AA seq
DB search
MAEEKTEDKTVYILDSYGLIYRAYFALLNHPLTNPGGDNISALVIFFKNLKALISKYNPC
YLAAAFDSRVKTFRHELYAEYKANRAKTPEDLHAQVPWIEEILEALEIPVLRYDGFEADD
IIATVAKKCAQENRPCRILSGDKDLLQLVTDSCLEMQPDRANGGWEVIGAQEVLEKWGIP
PEKILDYLSLVGDASDNVPGVKGVGDKTAIKLLTQYGTLDEIYAHASEIKGALGEKIRND
KDNAYFSKKLITLRYDVPVEIDFESFCTKNINFKSGAEVLEKYGAYAIAKSFASETAAEI
HSEEKLTLQEEPEEKKVLSVKQNEGDYKPCTNLDELKSFAQSILESAEKIVAFDTETDSL
NTHEANLVGFSLSVEKGKGIYVPVILSGGMFAPETISKKDCLAVLEKLFAEKELTLVMHN
GKFDLEVLAANGMSAKTECKIFDTMIAAWLLNPAASGKSPYSLEFLAETKLGLKGIEFKD
IVQKNQTFADVPLEKAFKYGAEDSDFTLQLYYLLKDEIKKSNLEKLFYEMEMKVLPILVS
MEIQGIHLDKKKLNEYKDELAVLISEKEKEIYKEAGCEFNIASPKQLQEILFEKRNLPHG
KKTKTGYSTDTAVLEELVFSTNDPLPKMILDYRSYTKLQSTYVEALPLLADKNGRIHTSF
LQTGTATGRLSSRDPNLQNIPVRDESGRRIRSAFTAVPGTVLISADYSQIELVVLAHLSG
DKNLCSAFINGIDVHKSTAALIYGISPEQVKPEQRRFAKTVNFGVMYGMSAFRLANELNI
SRTEAKNFIDQYFSTYSDVKKFLDETKRMARENGYVETITGRRRYIPEIKSSSKIVLQGA
ERIAINTPIQGSAADIVKTAMIKVQAALEKSGTGAKMLLQVHDELIFECPEDNAGNAISI
IQREMENAVQLKIPLRVSVERGKNWGEFH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagaaaaaactgaagataagactgtatatattcttgattcctacggcttgatt
tacagggcgtactttgcgcttttgaatcatcctcttacaaatcccggcggagacaatata
agcgcgctggttattttctttaaaaatctgaaggcgcttatttcaaaatacaatccgtgc
tatcttgctgcggcgttcgattcgcgtgtcaagactttccggcatgagctttacgcggaa
tacaaggccaaccgtgccaagactccagaagatttgcacgctcaggttccttggatagaa
gaaattcttgaggcgttggaaattcctgttttgcgctacgatggatttgaagctgatgat
attattgcgactgttgcaaaaaaatgcgcgcaggaaaaccggccgtgcagaattcttagc
ggcgacaaggatttgcttcagcttgttacggactcttgcttggaaatgcagccggacaga
gccaatggaggctgggaagttatcggcgcgcaggaggttcttgaaaagtggggaattccg
cctgaaaaaattcttgactacctttcgcttgtgggcgatgcttctgacaatgttccgggc
gtgaagggcgtgggcgacaagactgctataaaacttttgacccagtacggaactctcgat
gagatttatgctcatgcttctgaaataaaaggcgcgcttggagaaaaaatcaggaacgac
aaggacaacgcttatttttcaaagaagcttataactttaagatacgatgttcctgttgaa
attgattttgaatctttctgcacaaaaaatataaattttaagtcaggcgcggaagttctt
gaaaaatacggagcttatgcgattgcaaaaagttttgcttcggaaactgcggcggaaatt
cattcagaagaaaaattaactttacaagaagagccggaagaaaaaaaagttctgtcggta
aagcaaaatgaaggcgactacaagccttgcacaaatcttgacgagctgaaaagttttgcg
cagagcattttggaatccgcggaaaaaattgtggcgtttgacacagaaaccgacagcctg
aatacgcacgaggcgaatcttgttggttttagtctgagcgttgaaaaaggaaagggaatt
tatgttcctgttattttgagcggcggaatgtttgctccggagacgatttctaaaaaagac
tgtcttgctgttcttgaaaaactttttgcagaaaaagaacttacgcttgtaatgcacaat
ggaaaatttgaccttgaagttcttgccgcaaacggaatgagtgcaaaaactgaatgtaaa
atttttgacacgatgattgccgcatggcttttgaatcctgccgcttctggaaaatctccg
tacagccttgaatttcttgcggaaacaaagcttgggcttaaaggaattgagttcaaggac
attgttcagaagaaccagacttttgcggatgttcctttggagaaggcttttaagtacggc
gcggaagattctgattttacgttgcagctttattatcttttaaaagatgaaataaaaaaa
tcaaatcttgaaaagcttttttatgaaatggaaatgaaagttcttccgattcttgtttcc
atggaaattcagggaatccatctggataagaaaaaactgaatgagtataaagatgagctt
gcagttttgatttcagaaaaggaaaaagaaatttacaaagaggccggctgcgaatttaac
attgcctctccaaagcagcttcaagaaattttatttgaaaaacgaaatcttcctcatggt
aaaaaaacgaagactggctacagcacagatacagccgttcttgaagagcttgtgttttct
acaaatgatcctcttccaaaaatgattcttgattaccgttcgtacacaaaacttcaaagc
acttatgttgaagcattgcctttgctggcggacaagaacggcagaatccatacttcgttt
ttgcagacgggaactgccacaggtcgtctttcaagccgcgatccaaatttgcagaacatt
ccggtgcgcgacgagtctggaagaagaattcgttctgcgtttacagctgtgcctggaaca
gttcttatttccgcggattattctcaaattgaacttgttgttcttgcgcatttgagtggc
gataaaaatctttgctctgcgtttataaatggaatcgatgtccataaatctacagccgca
ttgatttacggaatttccccagagcaagtaaagcctgagcaacgacgttttgcaaagact
gtaaacttcggtgtgatgtacggaatgagcgcgtttcgtcttgcaaatgaactgaacata
agccggactgaagcaaagaatttcattgaccaatatttttcaacgtattccgatgttaaa
aaatttcttgatgaaacaaaacgcatggcaagagaaaacggctatgttgaaacgattacc
gggcgcagacgttatatcccggaaataaaaagctcaagcaaaattgtgcttcagggagct
gaaagaattgcgataaatactccgattcagggaagcgcggctgatattgtaaaaactgcg
atgataaaagttcaggctgcattggaaaaatccggcacgggcgcaaagatgcttttgcag
gttcacgatgaattgatttttgaatgcccggaagacaatgcgggaaatgcaatttcaatt
attcagcgcgaaatggaaaatgccgttcagctgaaaattccattgcgtgtgagtgttgag
cgcggaaaaaactggggagaattccactga
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