Treponema succinifaciens: Tresu_0466
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Entry
Tresu_0466 CDS
T01461
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD subfamily
KO
K03086
RNA polymerase primary sigma factor
Organism
tsu
Treponema succinifaciens
Pathway
tsu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Tresu_0466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tsu03021
]
Tresu_0466
Transcription machinery [BR:
tsu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Tresu_0466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AEB13418
UniProt:
F2NXU8
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All DBs
Position
508539..509390
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AA seq
283 aa
AA seq
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MTSVSAKDLDVVRIHLNEIKKIPLLTNDEEIQLATRAAAGDKAARDKLLTSNMRFVIKIA
SQYLNKGLEYEDLISEGYLGLMKALDHFDVSKGYHFISYAVWWIRQSIMKAIVDFGRPIR
LPVNKDAELTEIKRACHSVNPHGKKSEEEELEEVALKLGMTKHHIREMLNISQEMISLDS
PISGDSDTALVDTVSAGTFTPEDAAIDASLKTEIDKAFVGLDKKSVEVLNMRYGLNGQGE
RTLKEVGEKMNLSRERVRQIEKHAIAKIRANKICDISLKDYVA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgactagtgtttcagcaaaagatttggacgttgtgaggattcatctgaatgaaataaag
aaaattcctcttcttacaaatgacgaagaaattcagcttgcaacaagagctgctgctgga
gacaaagccgcaagagataaacttttgacttccaatatgcgctttgttataaaaattgct
tcacagtatttgaacaaaggtcttgaatacgaagatttgataagtgaaggctatcttgga
cttatgaaggctctcgaccattttgatgtaagcaaaggctaccattttatatcttatgct
gtctggtggattcgccagagcataatgaaagcgattgttgattttggtcgcccgatccgt
ctgcctgtaaataaagatgctgagcttactgaaataaaaagagcgtgtcacagcgtaaat
ccgcatggaaaaaaatcagaggaagaagaacttgaagaagttgcgctcaaacttggaatg
acaaagcaccatataagagaaatgcttaatatttcgcaggaaatgataagcttggattct
cctatcagcggcgattctgatactgcgcttgttgacacagtttctgccggaacttttacg
ccggaagatgcagctatcgatgcttctttgaaaactgaaattgacaaggcttttgtcggc
ttggataaaaaatcagttgaagttcttaatatgcgctatggtcttaatggtcaaggcgaa
agaacattgaaagaagtcggcgagaaaatgaatctttcaagagaacgtgttcgccagatt
gaaaaacatgcgattgcaaaaatccgtgcaaacaaaatctgcgatatttctcttaaggat
tacgttgcttaa
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