Treponema succinifaciens: Tresu_0997
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Entry
Tresu_0997 CDS
T01461
Name
(GenBank) 2,3 cyclic-nucleotide 2-phosphodiesterase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
tsu
Treponema succinifaciens
Pathway
tsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Tresu_0997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsu03019
]
Tresu_0997
Messenger RNA biogenesis [BR:
tsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tresu_0997
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
dUTPase
Motif
Other DBs
NCBI-ProteinID:
AEB13917
UniProt:
F2NUT6
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All DBs
Position
1060346..1061881
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AA seq
511 aa
AA seq
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MSMNLILFIVLPVAGILLGWTIRWVYARFQLSASEQKAERVKQDAIKEAEAQKKEILLQA
KEQLIQDRNQQERENRERRTELQRYESRVNKKEELLEQRNQEFEKRDKEFALNVAELHKR
EAVLSEEEGKLRVELERISGLTAEEAKALIIKNLENDARHDAQSLLNKIDQEAQLNAEKK
AQEILVSAIQRIATETTSEITVATVSLPSDEMKGRIIGREGRNIRSLETLTGVDIIIDDT
PEAVVISCFDPVRKEIARVALERLIIDGRIHPARIEEIVQKVTREIQQKIYEEGEKALFE
LGLHSMSQEAIRAIGRLYFRTSYGQNVLTHSKEVAELASILAAEVGANRELAKRAALLHD
IGKGAENDSDQNHAEVGAEMARKMGEDPRVVNAIEAHHNDCEPQTIEAVIVQVADAISAA
RPGARRETVDNYVKRLENLEETAKKFHGVEQAYAIQAGRELRILVNNDKIPDEQVKDLAK
QIAKQIETDLRYPGRIKITMIRETRIIEYAR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgaatttgatattgttcattgttctccctgtagcaggaatacttcttggatgg
acaattcgctgggtttatgccagatttcaactttccgcctcggagcaaaaagccgagcgc
gttaaacaagatgcaataaaagaagcggaagctcagaaaaaagagattcttcttcaggca
aaagaacaactcattcaggaccgtaatcagcaggaaagggagaaccgtgaacgccgtaca
gaactacagcgttatgaaagccgtgtaaacaaaaaagaagagcttctggagcaacgaaat
caggagtttgaaaagcgcgacaaggaatttgctctaaatgtagcggagcttcacaagcgc
gaggctgttctttctgaagaagaaggaaagcttcgggtggagcttgaaagaatttcgggg
cttactgcggaagaagcaaaggctcttataatcaagaaccttgaaaatgacgcccgccat
gacgctcagtctttgctgaacaagattgatcaggaagctcagcttaatgcagaaaaaaaa
gcgcaggaaattcttgtttccgccattcagcgcattgcaacagaaactacaagcgaaatc
acagtcgcgacagtttctcttccaagtgacgaaatgaagggccgcattattggacgcgaa
ggccgcaacatccgttctttggaaactttgactggcgttgacattattattgatgatacg
ccggaagccgttgttatcagttgctttgatcctgtaagaaaggaaattgcgcgtgtggct
ttggagcgtcttattatcgacggaagaattcatccggctcgtatagaagaaattgttcag
aaggttacccgcgaaattcagcagaagatttacgaggaaggcgaaaaggctttgtttgag
cttggtctgcacagcatgagccaggaagcgataagagctatcggccgcctttactttaga
acaagctacggacagaatgttcttacgcactcaaaggaagttgctgagcttgcaagcatt
cttgccgcagaagtcggtgcaaacagggaacttgcaaaacgcgcggcattgcttcatgac
attggaaaaggcgcggaaaatgacagcgaccagaaccatgcagaagttggtgcggaaatg
gcacgcaagatgggcgaagatcctcgagtagtcaatgcaattgaagcgcaccacaacgat
tgcgagcctcagacaatagaagctgttattgttcaagttgccgatgcgataagcgcagcc
cgtccgggagcaagacgagaaactgtagacaactatgttaagcgtcttgagaatcttgag
gaaactgcaaagaaattccacggagtagagcaggcctatgcaattcaggctggacgtgaa
cttcgcattcttgtaaacaatgataaaattccagatgagcaggtaaaagatcttgcaaag
cagattgcaaagcagattgaaactgacttgcgttatcctggaagaatcaaaattacaatg
attcgcgaaacccgcattattgaatacgcaagataa
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