Treponema succinifaciens: Tresu_1215
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Entry
Tresu_1215 CDS
T01461
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tsu
Treponema succinifaciens
Brite
KEGG Orthology (KO) [BR:
tsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsu03019
]
Tresu_1215
03009 Ribosome biogenesis [BR:
tsu03009
]
Tresu_1215
03036 Chromosome and associated proteins [BR:
tsu03036
]
Tresu_1215
Enzymes [BR:
tsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Tresu_1215
Messenger RNA biogenesis [BR:
tsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Tresu_1215
Ribosome biogenesis [BR:
tsu03009
]
Eukaryotic type
90S particles
RNase
Tresu_1215
Prokaryotic type
rRNA processing factors
Tresu_1215
Chromosome and associated proteins [BR:
tsu03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Tresu_1215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
MobC_2
Motif
Other DBs
NCBI-ProteinID:
AEB14123
UniProt:
F2NYA2
LinkDB
All DBs
Position
1299479..1300225
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AA seq
248 aa
AA seq
DB search
MGFKGLFYPEKSLTRERKKELDEFCRHLKLHFKNYSLLDLAFHHRSYSNENTSYKRYNNE
RLEFLGDSVLGLATAAFLYNDMSQNKEGDLAKIKANVVSEQSLAPIAVEKMHIDKYLVLG
KGEELSGGRTKKAILADAVEAVIGALYIDSGYESAERLVLELIIPEIRKVQSDHGSKDYK
TLLQEFYQKKTNACPSYSLVRTTGPDHDRIFYVSVKLGDVVYGPASGKNKKSAEQAAAGV
ACKALGIE
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgggttttaaaggtcttttttatccagaaaaaagtttgacaagagaaagaaaaaaggag
cttgatgaattttgcaggcatttaaagcttcattttaaaaattattctttgctggatttg
gcgtttcatcacagatcttattcaaacgaaaatacttcctataagagatataacaatgag
cgtcttgaatttcttggggacagcgtgcttggacttgcgactgctgcatttttgtataat
gatatgtcgcagaacaaagaaggcgatcttgcaaaaataaaagcgaatgttgtaagcgag
cagtctcttgcgccgattgctgttgaaaaaatgcacattgacaaatatcttgtgcttgga
aaaggcgaggagctttctggcggaagaacaaaaaaggctattctggcagatgctgttgag
gctgttataggtgctttgtatattgattctggatatgaaagcgcggagaggcttgttctt
gaactgattattcctgaaataagaaaagttcaaagcgatcacggaagcaaggattataaa
actttgcttcaggaattttatcagaaaaaaacaaatgcttgtccttcttattcgcttgta
aggacaactggtccggatcatgacagaattttttatgtctctgtaaagctcggagatgtt
gtttacggacctgctagcggaaaaaacaaaaaatcagcggaacaggcggcagctggagtt
gcttgcaaggctcttggaattgaataa
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