Thiomicrolovo subterrani: WCX49_00110
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Entry
WCX49_00110 CDS
T11234
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
WCX49_00110 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsub03019
]
WCX49_00110 (recQ)
03400 DNA repair and recombination proteins [BR:
tsub03400
]
WCX49_00110 (recQ)
Enzymes [BR:
tsub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
WCX49_00110 (recQ)
Messenger RNA biogenesis [BR:
tsub03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
WCX49_00110 (recQ)
DNA repair and recombination proteins [BR:
tsub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
WCX49_00110 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
XAU02866
LinkDB
All DBs
Position
21893..23686
Genome browser
AA seq
597 aa
AA seq
DB search
MPDHATDKYSVLKDRFGHNGFRPLQEEAVDTILAGRDLLMILPTGGGKSLSYQLPALLME
GMTVVISPLLALMHDQVQSLKAQGMRAEMLSSMQTAEESGEIVRRLYAGEIDFLYLSPER
LNTEGMRTILSNIRLNYFVIDEAHCISEWGHEFRADYRALSQLRDFFPGIAIAAFTATAT
AHVREDILRLLRLNDPNVLQGQIYRDNLQITVRHRIKDGYDQLRDFLDDHKTESGIVYAF
SRKSVEAVAHFLQQKGYAAAAYHAGMPTEQRNAVFDDFVHDRVRIIVATIAFGMGIDKSN
IRYVFHMSLPKTVENYYQEIGRAGRDGDHADVVMLFGAQDLIQQKRFVEMNEDETYKAHL
MQKLGAVHRYASAETCRHQQLAEYFGDRIAPCGTHCDNCLEPEYDKRDITTEAQMLLSCV
YRTGQRFGKSYLIDVLRGSREQKLLANGHDELSVYGVGEALNKKQWLVVIDRMLEIGAVD
LNEHHGLFLTQAGLAVLKGEEKVLIRADRLNVRAKTVQKAAPEHFDYDTELFEALRALRF
EIAQEHGVPPYVVFGDKTLKEMAASRPQTKAQMLEVGGVGEVKFERYGAQFLLLLQS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgcccgatcacgctaccgataaatattccgttctcaaagaccgcttcggccataacggc
ttccgtccgctgcaggaggaggccgtcgacaccatccttgccggccgcgacctgctgatg
atcctgcccaccggcggcgggaaatcactctcctaccagttgcccgccctgctgatggaa
ggcatgaccgtcgtcatctccccgctgctcgccctcatgcacgaccaggtccagagtctc
aaagcccaggggatgcgcgcggagatgctctcctcgatgcagacggcggaggagagcggc
gagatcgtacggcggctttatgccggggagatcgacttcctctacctctcccccgaacgc
ctcaacaccgaggggatgcgcacgatcctctcaaacatcaggctcaactacttcgtcatc
gacgaagcgcactgtatcagcgagtgggggcatgaattccgggccgactaccgtgccctc
tcgcagctgcgggatttctttcccgggatcgccatcgccgcctttaccgcgacggcgacg
gcgcatgtgcgcgaggacatcctgcgcctgctgcgtctgaacgatcccaacgtcctgcag
gggcagatctaccgcgataacctccagatcaccgtccgccaccggatcaaggacgggtat
gaccagctccgcgatttcctcgacgaccacaaaacggagagcgggatcgtctacgccttc
tcccgcaaaagcgtcgaggccgtcgcgcatttcctgcaacagaaagggtatgcggctgcg
gcctaccatgccggaatgccgacggaacagcgcaatgccgtttttgatgacttcgtccac
gaccgggtccggattatcgtcgcgacgatcgccttcgggatgggaatagacaagagcaac
atccgctacgtttttcacatgagcctccccaagacggtggagaactactaccaggagatc
ggccgggccgggcgtgacggcgaccacgccgacgtcgtcatgctcttcggggcccaggac
ctgatccagcagaagcggttcgtcgagatgaacgaggatgaaacctacaaggcgcacctg
atgcagaagctcggcgccgtacaccgctacgcttcggccgagacctgccgccaccagcag
ctggccgaatatttcggcgaccgcatcgcgccctgcgggacgcactgcgacaactgcctg
gagcccgagtacgacaaacgcgacatcacgaccgaggcgcagatgctgctctcctgtgtc
taccgtaccgggcagcggttcggcaaaagctacctcattgacgtgctgcgcggctcgcgg
gagcagaagcttcttgccaacggccatgacgaactctcggtctacggggtgggcgaagcc
ctgaacaagaagcagtggctcgtcgtcatcgaccggatgctggagatcggggcggtggac
ctgaacgaacaccacggcctctttctgacccaggcggggctggccgtgctcaaaggcgag
gaaaaggtccttatccgcgccgaccgcctcaatgtccgggccaagactgtccaaaaagcc
gcgccggagcatttcgactacgatacggagcttttcgaggcactgcgggcactgcggttc
gagatcgcccaggagcacggggtgccgccctacgtcgttttcggggacaaaaccctcaag
gagatggcggcatcacggccgcagacgaaagcgcagatgctcgaagtcggcggtgtcggc
gaggtgaaattcgagcgctacggggcgcagtttttgctgctgctccagagctga
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