Thiomicrolovo subterrani: WCX49_01250
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Entry
WCX49_01250 CDS
T11234
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub00300
Lysine biosynthesis
tsub00470
D-Amino acid metabolism
tsub01100
Metabolic pathways
tsub01110
Biosynthesis of secondary metabolites
tsub01120
Microbial metabolism in diverse environments
tsub01230
Biosynthesis of amino acids
Module
tsub_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCX49_01250 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WCX49_01250 (dapF)
Enzymes [BR:
tsub01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
WCX49_01250 (dapF)
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Motif
Pfam:
DAP_epimerase
DUF4926
Motif
Other DBs
NCBI-ProteinID:
XAU03086
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Position
244714..245463
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AA seq
249 aa
AA seq
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MMIAKYSASGNDFVLFHSFIARDRSELARTLCDRQNGVGADGLIVLVPHAEHDFEWQFYN
SDGSTAEMCGNGSRACAHYAYSNGLAPANMTFLTEAGVIGAEVEGDMVQSDLTPPKILRE
DIVAGGKKWWLLDTGVPHLVTFDADMENFDLAEARTLRFEHNANVNIASVNSDGSIRVRT
YERGVEDETLACGTGMAACFYRANREEFVGDKAEVYPKSGETLYLGLEEGTITFKGLVKK
TFETVLDVK
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgatgatcgccaaatacagcgccagcggtaacgactttgtcctcttccacagctttatt
gcaagagaccgctccgaactggcacgcaccctctgcgaccgccagaacggcgtcggcgcc
gacggccttatcgtcctcgtgccgcacgcggagcacgatttcgagtggcagttctacaac
agcgacggctcgacggcggagatgtgcggcaacggcagccgcgcctgcgcgcactacgcc
tacagcaacggccttgcgccggcgaacatgaccttcctgaccgaagcgggcgtcatcggc
gccgaggtggaaggcgacatggtgcagagcgacctgaccccgccgaagattctccgcgag
gacatcgtcgcgggcgggaaaaagtggtggctgctcgatacgggcgtgccccacctcgtt
accttcgatgccgacatggagaacttcgaccttgcggaggcgcgtacgctgcgctttgaa
cacaacgccaacgtcaacatcgcctctgtcaacagcgacggctctatccgggtgcggacc
tacgagcgcggcgtcgaggatgaaacgctcgcctgcgggacgggaatggcagcctgtttt
taccgtgccaaccgtgaagaatttgtcggcgacaaggcggaggtctatccgaaaagcggg
gagacgctctatctcgggctggaagaggggacgattaccttcaaagggctcgtgaagaag
acgtttgagacggttttagacgttaaataa
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