KEGG   Thiomicrolovo subterrani: WCX49_01250
Entry
WCX49_01250       CDS       T11234                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
tsub  Thiomicrolovo subterrani
Pathway
tsub00300  Lysine biosynthesis
tsub00470  D-Amino acid metabolism
tsub01100  Metabolic pathways
tsub01110  Biosynthesis of secondary metabolites
tsub01120  Microbial metabolism in diverse environments
tsub01230  Biosynthesis of amino acids
Module
tsub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:tsub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    WCX49_01250 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    WCX49_01250 (dapF)
Enzymes [BR:tsub01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     WCX49_01250 (dapF)
SSDB
Motif
Pfam: DAP_epimerase DUF4926
Other DBs
NCBI-ProteinID: XAU03086
LinkDB
Position
244714..245463
AA seq 249 aa
MMIAKYSASGNDFVLFHSFIARDRSELARTLCDRQNGVGADGLIVLVPHAEHDFEWQFYN
SDGSTAEMCGNGSRACAHYAYSNGLAPANMTFLTEAGVIGAEVEGDMVQSDLTPPKILRE
DIVAGGKKWWLLDTGVPHLVTFDADMENFDLAEARTLRFEHNANVNIASVNSDGSIRVRT
YERGVEDETLACGTGMAACFYRANREEFVGDKAEVYPKSGETLYLGLEEGTITFKGLVKK
TFETVLDVK
NT seq 750 nt   +upstreamnt  +downstreamnt
atgatgatcgccaaatacagcgccagcggtaacgactttgtcctcttccacagctttatt
gcaagagaccgctccgaactggcacgcaccctctgcgaccgccagaacggcgtcggcgcc
gacggccttatcgtcctcgtgccgcacgcggagcacgatttcgagtggcagttctacaac
agcgacggctcgacggcggagatgtgcggcaacggcagccgcgcctgcgcgcactacgcc
tacagcaacggccttgcgccggcgaacatgaccttcctgaccgaagcgggcgtcatcggc
gccgaggtggaaggcgacatggtgcagagcgacctgaccccgccgaagattctccgcgag
gacatcgtcgcgggcgggaaaaagtggtggctgctcgatacgggcgtgccccacctcgtt
accttcgatgccgacatggagaacttcgaccttgcggaggcgcgtacgctgcgctttgaa
cacaacgccaacgtcaacatcgcctctgtcaacagcgacggctctatccgggtgcggacc
tacgagcgcggcgtcgaggatgaaacgctcgcctgcgggacgggaatggcagcctgtttt
taccgtgccaaccgtgaagaatttgtcggcgacaaggcggaggtctatccgaaaagcggg
gagacgctctatctcgggctggaagaggggacgattaccttcaaagggctcgtgaagaag
acgtttgagacggttttagacgttaaataa

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