Thiomicrolovo subterrani: WCX49_02550
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Entry
WCX49_02550 CDS
T11234
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
tsub Thiomicrolovo subterrani
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsub02000
]
WCX49_02550
Transporters [BR:
tsub02000
]
Other transporters
Pores ion channels [TC:
1
]
WCX49_02550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OmpA_membrane
Motif
Other DBs
NCBI-ProteinID:
XAU03335
LinkDB
All DBs
Position
502556..503719
Genome browser
AA seq
387 aa
AA seq
DB search
MKMKRTAATVFMVAAALQGEAVERIAMPGPYLGANLGYATGSVSLSTAEKEVCQGDPACY
VTDGSADEDSFGAKLFGGYLFNQYFAVEGGYFNLGELSFKSVTNTAETYKGTLSAQGINM
DVVGHLPVFDALSLFARIGVLYGEMSKDYSYSGGTLLVNGVPKDMHVTKWDVGYKLGAGI
QFDFTPALGVRGEWEGYHLAEAGSSSDYDVNLYSVGVVYRFGIPEPEPEKVVVVKEVPVP
GEGTVLEKEVVKEVEVVKEVPKPVIIKKPTERVVLASDTLFDFDKSDVKPQGDAALKQLV
QRLQKNDRLVVVGHTDSVGTEVYNMKLSQRRANAVRSRLIGLGIAAGQIETRAMGESSPV
ATNETDAGRTANRRVEIEVYAAPKNEE
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaacggacggcggcgacggtatttatggtggcggcagcccttcaaggagag
gcggtcgaacgtattgcaatgcccggaccctacctgggggcgaacctggggtatgcgacg
ggatcggtctcactgtcgacggccgaaaaagaggtgtgccagggcgaccctgcctgttat
gtgacggacgggtcggcggatgaggattcgttcggtgcgaaactcttcggcgggtatctg
ttcaaccagtactttgccgtcgaagggggatatttcaaccttggcgagctctcgttcaag
agtgtcaccaatacggcggagacctataaaggaaccctgtcggcacaggggatcaacatg
gacgtggtcggccacctcccggtttttgacgcgctttcgctctttgcacgtatcggcgtg
ctgtacggcgagatgagcaaggattacagttacagcggcggcacgctgctggtcaacggg
gtgcccaaagatatgcatgtcaccaaatgggatgtcgggtacaaactcggtgccggcata
cagttcgatttcacccccgcactcggcgtacgcggcgaatgggaagggtaccacctcgcc
gaggccggttccagttcggattatgacgtcaatctctactccgtcggtgtcgtctaccgc
ttcgggatcccggagccggagccggaaaaagtcgtcgtggtgaaagaggtgccggtcccg
ggcgagggaacggtcctggaaaaagaggtcgtcaaagaggtcgaagtcgtgaaagaggtg
cccaaaccggtgatcatcaagaaaccgaccgagcgggttgttctggcatcggacaccctg
ttcgatttcgacaagtcagacgtcaagccgcagggggacgccgcactcaaacagctggtc
cagcggctgcagaagaatgaccgcctggtggtcgtcgggcatacggacagcgtcgggacg
gaagtgtacaatatgaaactttcccagcggcgtgcaaacgccgtccgcagcaggctgatc
gggctcggcattgcggccggccagatcgaaacccgtgccatgggtgaaagcagcccggtg
gcgacaaatgaaacggatgcggggcgtaccgccaaccgccgcgtcgagatcgaagtctac
gccgcgcctaaaaacgaggagtag
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