Thiomicrolovo subterrani: WCX49_02960
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Entry
WCX49_02960 CDS
T11234
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
tsub Thiomicrolovo subterrani
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsub03009
]
WCX49_02960 (rimO)
Enzymes [BR:
tsub01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
WCX49_02960 (rimO)
Ribosome biogenesis [BR:
tsub03009
]
Prokaryotic type
ribosomal protein modification factors
WCX49_02960 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XAU03415
LinkDB
All DBs
Position
complement(580822..582141)
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AA seq
439 aa
AA seq
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MSTKKLHIVSLGCTKNLVDTEVMMGRLQSYELTQESEDADVIIVNTCGFIDAAKEESLNT
VLSLDASRKEDSVLVMAGCLSERYKEELSKELSEVDIFTGVGDYDKIDELLAAKQSRFSD
EVYLIDGAERVVTGSTYHAYVKLSEGCNQSCSFCAIPSFKGKLHSRTLESIAAEVEGLVK
KGYYDFSFISQDSSSFLRDQGFKDGLIQLIKRVELIEGVRSARILYLYPTTTSMKLLETI
AKSKTFHNYFDMPIQHIDDGMLKIMKRGAGREQTEKLLDYMRKLPERFVRTSFIVGHPGE
TEESFRAMCDYARTFGFDRINVFAYSDEEGTSAFERTDKVDAETIAERAEILGAIAEEAK
LASLQKMVGSEITLVIDGESDEHEYLLSARDLRWAPEIDGEIYVNDNALDEELSFGVPYR
AKIMELVGETLTATVTGHA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaaaaaaactgcatatcgtctcgttggggtgcaccaagaacctcgtggatacc
gaagtcatgatgggacggctacaatcgtacgaactgacccaggagagcgaagatgccgac
gtcatcatcgtcaacacctgcggctttatcgacgcggccaaggaagagtccctcaatacg
gtcctgagcctcgatgcttcccgcaaggaggactctgtcctcgtcatggccggctgcctc
agcgagcgctacaaggaagaactgagcaaagagctcagcgaggtcgacatcttcaccggt
gtcggcgactatgacaagatcgatgaactcctggcagcaaaacagagccgcttcagcgac
gaggtctacctgatcgacggtgccgagcgcgtcgtcacgggctcgacctatcacgcctat
gtcaaactctccgaggggtgcaaccagagctgttcgttctgcgccatcccctccttcaaa
ggtaagctccactcccggacgctggagagcatcgccgccgaggtcgaggggcttgtaaag
aaggggtattacgacttcagtttcatctcccaggactccagctccttcctccgcgaccag
ggtttcaaagacgggctcatccagctcatcaaacgcgtcgagctgatcgaaggggtcaga
agtgcccgcatcctctacctctatccgacgacgacatcgatgaaactgctggagacgatc
gcgaagtcgaaaaccttccacaactacttcgatatgccgatccagcacatcgacgacggc
atgctcaagattatgaaacgcggtgccggccgggaacagactgagaaactgctcgactac
atgcgcaagctgccggagcgtttcgtacgtaccagcttcatcgtcggccacccgggcgaa
acggaggagagcttccgggcgatgtgcgattacgcccgcaccttcggttttgaccgcatc
aacgtcttcgcctactccgacgaggagggcacaagcgcctttgagcgcaccgacaaggtc
gacgcggagacgattgcagagcgtgccgagatcctgggcgctattgccgaagaggcgaaa
ctcgcttccctgcagaagatggtcggcagtgaaatcaccctcgtcatcgacggcgaaagc
gacgaacatgaatacctcctcagcgcacgcgacctgcgctgggccccggagatcgacggc
gagatctatgtcaacgacaacgccctcgacgaagagctctctttcggcgtaccctaccgc
gccaagatcatggagcttgtcggtgagacactgacggcgaccgttacgggccatgcttga
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