Thiomicrolovo subterrani: WCX49_02990
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Entry
WCX49_02990 CDS
T11234
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
WCX49_02990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tsub03400
]
WCX49_02990
Enzymes [BR:
tsub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
WCX49_02990
DNA repair and recombination proteins [BR:
tsub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
WCX49_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
Viral_helicase1
SH3_13
AAA_11
PIF1
AAA_16
AAA_22
OB_YrrC
AAA
HHH_5
NAT10_TcmA_helicase
TraI_hel_assoc_N
Mg_chelatase
NPHP3_N
AAA_5
UvrD_C
ABC_tran
DUF87
AAA_18
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XAU03421
LinkDB
All DBs
Position
586350..588554
Genome browser
AA seq
734 aa
AA seq
DB search
MKLIGQIEKIFYEDEGFFVGVLGTGEKISGHYFESSVASIENAAVTLEGEYVEHPKYGRT
FKFHTLNVNQHELFFFLNRVVKGFPKKVTAELIERFGEAGLIDILDNDIEKLTEFAGIKQ
KRLERIQGRWKQFRSMRELGSLLAPFDVTPAMLTTIAGAMKEVRDPVAAIRKNPYILTNV
EGIGFRRADELALKMGVDTGDDRRVACAMEYAIAQRCERDGNSCLGKEELFAELGTLLQE
GAVPQRYEAVLAEHVAEESIRPLNKELLSPVRLYEAERFLYEEFRRRAKRDDTPLTEDLD
AFLAEAAFTPGEQQREALETLNRGKRLFCLVGYAGTGKSTTAKLLLDLLALRHGREQVIT
CALSGIASQRIGEVSGYESATIQSLLVRFEERDSMPYKVVLIDEASMINAPLFARLLSKC
HRDATLIIVGDDAQLPPIGAGDVLGDIIRFRLMPVVTLTKIYRQSETQAIPAIADAVRHS
EIPALYGEYEDFRFLPIASHDFSDREAHAEALLAALAEQAVNAIPACREHLKQKELYAYL
TAFQVISPMKGGTLGTENLNRVLQGYFNPSPRQTVQRGERRFALMDKVVHTKNDNLPSWS
LQEYKAEAPSEKRRIFNGMLGLLFRIDEEAEQVYVVYPLEEMVACYDYTQLTSHLMLAYA
LTVHKVQGMEYRSIAMPLTFSHYAMLDRKLLYTAITRAKEHCFIAGEADGFARALLRGET
VSRRTVLQYLAAAE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcatcggccagatcgagaagatcttttacgaggacgaaggcttcttcgtgggc
gtgctcggaacgggcgagaagatcagcggccactactttgagagcagtgtcgccagcatc
gaaaacgcggccgtcacccttgaaggcgagtatgtcgaacaccccaaatacgggcgtacc
ttcaaattccacaccctcaacgtcaaccagcatgaacttttcttttttctcaaccgtgtc
gtcaaaggcttcccgaaaaaagtgaccgccgaactgatcgagcgtttcggcgaggcgggc
ttgatcgacattctcgacaacgacatcgaaaaactgaccgaatttgcgggcataaagcag
aaacggctggagcggatccaggggcggtggaaacaattccgttccatgcgtgaactggga
agcctgctggccccctttgacgtcaccccggccatgctgacgacgatcgccggtgcaatg
aaagaggtccgggaccctgtcgcggcgatccggaagaacccctatatcctgaccaacgta
gaggggatcggtttccggcgtgccgatgaactggcgctcaagatgggggtcgataccgga
gatgaccggagagtggcctgcgccatggagtatgcgattgcacagcgctgcgaacgcgac
ggcaacagctgtctcggcaaagaggaacttttcgcggaactgggtaccctgttgcaggaa
ggtgccgtgccgcagcgttacgaagcggtattggcggagcatgtcgcagaggagtcgatc
cgtccgctgaacaaagagctgctctcgccggtccggctctacgaggcagagcgttttctc
tatgaagagttccggcgcagggcgaaacgcgatgatacccctttgaccgaagatcttgac
gcttttttggccgaggcggcattcacccccggggagcagcagcgcgaagcgctcgagacg
ctcaaccgggggaaacggctcttctgtctggtcggttatgccgggacgggcaagagtacg
acggcaaagcttttgctggacctcctggccctgcggcacggacgtgaacaggtgatcacc
tgtgcgctcagcggcatcgcgtcccagcgcatcggggaggtgagcgggtatgagagtgcg
acgatccagagcctgctggtacggtttgaagagcgcgacagcatgccctacaaagtcgtg
cttatcgatgaagcctctatgatcaatgcaccgctttttgcccggctgctcagcaaatgc
cacagggatgcaacgcttatcatcgtcggtgacgacgcacagctgccgccgatcggcgcc
ggggacgtgctcggcgacatcatccgtttcagactgatgccggtggtgaccttgacgaag
atctaccgccaaagcgagacacaggcgataccggccatcgccgatgcggtgcgccacagc
gagatccccgcactttacggggagtacgaagacttccgcttcctgccgatcgcgtcacac
gatttctccgaccgtgaagcccatgccgaggcactgttggcggcgctggcagagcaggcg
gtgaatgcgattccggcatgccgcgagcatctgaagcaaaaagagctttatgcctacctg
acggctttccaggtgatcagcccgatgaaggggggtacgctcggtaccgagaacctaaac
cgggtgctgcagggctattttaacccctccccccgccagaccgtccagcgcggcgaaaga
cgttttgcgctgatggacaaggtggtccataccaaaaacgacaacctgccttcctggagc
ctgcaggagtacaaagcggaggcgccttcggagaaacgccgaattttcaacgggatgctg
gggctgcttttccggatcgacgaagaggcggagcaggtctatgtcgtctatcccctggag
gagatggtcgcttgttacgactatacgcaactcacctcgcacctgatgcttgcctatgcc
ctgacggtacacaaagtccaggggatggagtaccgcagcatcgcgatgccgctgacgttc
agccattatgccatgctggaccggaaactgctttatacggcgatcacccgcgcgaaagag
cactgtttcatcgccggcgaggctgacgggttcgcgcgtgccttgctgcggggagagacg
gtatcgcgtcgtacggtgttgcagtacctcgcggctgcagaataa
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