Thiomicrolovo subterrani: WCX49_06195
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Entry
WCX49_06195 CDS
T11234
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub00020
Citrate cycle (TCA cycle)
tsub00190
Oxidative phosphorylation
tsub00650
Butanoate metabolism
tsub00720
Other carbon fixation pathways
tsub01100
Metabolic pathways
tsub01110
Biosynthesis of secondary metabolites
tsub01120
Microbial metabolism in diverse environments
tsub01200
Carbon metabolism
Module
tsub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
tsub_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
tsub_M00173
Reductive citrate cycle (Arnon-Buchanan cycle)
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
WCX49_06195 (sdhA)
00650 Butanoate metabolism
WCX49_06195 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
WCX49_06195 (sdhA)
00720 Other carbon fixation pathways
WCX49_06195 (sdhA)
Enzymes [BR:
tsub01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
WCX49_06195 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
HI0933_like
FAD_binding_3
NAD_binding_8
GIDA
FAD_oxidored
Pyr_redox
Cytadhesin_P30
Motif
Other DBs
NCBI-ProteinID:
XAU04045
LinkDB
All DBs
Position
complement(1213949..1215661)
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AA seq
570 aa
AA seq
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MSIPIYTYDAVIVGSGLAGSAAARELKLAGKNVAVITKLHPLRSHSGAAQGGINAALSDV
DSIELHEFDTVKGADYLADQDAVELMCQKAPETIRWAERMGAAFSRTDDGKIAQRPFGGQ
SSPRACFAKDRTGLTLLQTIYEQALRVGVDFIDEWYAADIIYEDGKVSGIVAFNIRNQEK
AIFNAKAVMFATGGYARAFKISSNAHANTGDGLSIVARHGLPLEDMEFVQFHPSGLSGSG
ILISEAARGEGGKLLNSEGERFMERYAPNKLELASRDVVARAIINEIREGRGVGPRKDAV
YIDLTHLGKEKIMERLPELRDLAITFLGLDMIKEPILISATAHYSMGGIPVDIDGHVRKN
NDELVEGFYAAGECACVSVHGANRLGANSVLEALLFGRHVGQSMVADIEKLYLREAEQSD
ADTMIEEMERILTSNGKETVPGLRNELQQSMTDNAGVFRTEETLSKQVEIVKELRKRFAN
IRIDDKSKIFNTDLQEAIELGHMLDYSLFIVESALARKESRGAHYREDFTTRDDEGFMKH
TMAYMDAEGNISLDYMAVTPGKFEPQERTY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgagtattcctatttatacttatgatgcggtaattgtcggttccggcctggcaggttct
gcggctgccagagaactgaaactcgccggcaagaacgtcgccgtcattaccaaactccac
ccgctgcgttcgcactccggtgcggcgcagggcggtatcaacgctgcgctcagcgatgtc
gacagcatcgagctgcacgaattcgacaccgtcaagggtgcggactacctcgccgaccag
gacgcggttgagctgatgtgtcagaaagccccggaaaccatccgctgggctgagcgcatg
ggagcggctttcagccgtacggatgacggtaagatcgcccagcgccccttcggaggccag
tcctccccgcgcgcctgtttcgcgaaagaccgtacgggtctgacccttctccagacgatc
tacgagcaggcgctgcgcgtcggcgtcgatttcatcgacgagtggtacgccgccgatatc
atctatgaagatggtaaagtaagcggcatcgtcgccttcaatattcgtaaccaggaaaaa
gcgatcttcaacgccaaagccgtcatgttcgccaccggcggatacgcccgcgcattcaag
atcagctcaaacgcccacgccaacaccggcgacggcctctccatcgtcgcacgccacggc
ctgccgctcgaggatatggaattcgtccagttccacccgtcagggctttcaggaagcggt
atccttatctctgaagcggcccgcggcgaaggcgggaaactgctcaactccgaaggcgaa
cgcttcatggagcgctacgcgccgaacaagcttgaactggcttcccgcgacgtcgttgcc
cgcgccatcatcaacgaaatccgcgaaggacgcggggtcggaccgcgcaaagacgccgtc
tacattgacctgacgcacctgggcaaagagaagatcatggagcgcctgccggaactgcgc
gacctggccatcaccttcctcggcctcgacatgatcaaagaacctatcctgatctccgcc
acggcgcactactccatgggcggtatcccggtcgacatcgacgggcacgtccgcaaaaac
aacgacgagctcgtcgaaggcttctacgcggcgggcgaatgcgcctgtgtcagcgttcac
ggtgccaaccgcctgggagccaactccgtcctcgaagccctgctcttcggccgccacgtc
ggtcagagcatggtggccgatatcgagaagctctacctgcgcgaggcagagcagtccgat
gcagatacgatgatcgaagagatggagcgtatccttacttccaacggcaaagagacggtt
ccgggcctgcgcaacgaactgcagcagagcatgacggacaacgccggcgttttccgtacc
gaagagaccctctccaagcaggtcgagatcgtcaaggaactgcgcaagcgctttgcgaat
atccgcatcgacgacaagtcaaagatcttcaacacggatctccaggaagcaatcgagctt
ggccacatgctcgactactccctctttatcgtcgaaagcgccctggcgcgcaaagagagc
cgcggtgcacactaccgcgaggactttacgacccgcgatgacgaaggtttcatgaaacac
acgatggcctacatggatgccgagggcaacatcagcctcgactacatggccgtaacgccg
ggtaaattcgagccgcaagagcgtacatactaa
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