Thiomicrolovo subterrani: WCX49_09535
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Entry
WCX49_09535 CDS
T11234
Name
(GenBank) tandem-95 repeat protein
Organism
tsub Thiomicrolovo subterrani
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
He_PIG
aBig_2
CshA_repeat
Big_2
RibLong
Big-like
Motif
Other DBs
NCBI-ProteinID:
XAU02154
LinkDB
All DBs
Position
complement(1828535..1833943)
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AA seq
1802 aa
AA seq
DB search
MVEFRKIMLSAAAVLAIGGCGGGGGGGSSDPASSGGVIDGYVSGATVFADSTGEGEHNDT
EPSTVTDTNGDFAFAVTIADGTKIYAYGGTDISTGFPFEGRLSTVYDATRPIVLSPLTTY
VAAIMASDPTMTFDTAADAVAANLGISADAVKNDPMLDSDSFMAAQKVQKVVEVLSAATK
TDGESFNDAYEQVFNALATTTSGEFNATELAAEVGADPSIATFVETLAGTIDDLAANVTT
VGELDGFGETINTYAEAAEGAIENGDLTAVSDLTTTLGDMNTTQVAQDIETGTYVDPMIA
ALAEVEDALTNNITYLGTNTANENITADLVLSSPAAAPYDTPDLNLTWSATPMGVIDVAT
GAVTRSDTADVAVVLKATVANSLVTNNRAFDLVVMRNEYAPVAVADNLNLDEDTNATLNV
LANDTDQNGDTLFVTAVSAAGHGAAVINPDGTVTYTPAANYNGPDSFTYTVGDGTGRSAD
GNVSVTVAAVNDAPTIGGTPAASVDQDAAYSFTPSSGDIDGDTLTFSIVNPPAWAAFDPA
TGALTGTPGNGDVGTTADINISVTDGTATVSLPLFSVTVVNVNDAPTIDGTPATSVNQDA
PYSFTPGASDLDGDTLTFSIQNKPSWATFDTATGALSGTPGNADVGTTTGIVISVSDSLL
TASLAAFDLEVINVNDAPTASAASFQVQTNTQLDGDLKPYASDIDVGDTLTFTQVGTLAG
LTLNSNGTFTFTSASEGNFTFDYEVSDGTLTSAPATVTISVVANFSPIAADFTATTDEDT
AVLIDVVAHTGDSDGSVDATTVAASGATDGNLSVNPTTGVVTYMPNANFNGTDSFTYTIQ
DNQGATSLPATVTLTVAPVNDAPTIDPIGNPPAVAVSAPIFEVPVSIADVDGDALTLSAV
SSNPGVAAVSANGTTVAVDPVSEGTATVTVTVDDGVLTAQETFVVTVVADPVLMDNSFYD
GQYLYDYWLENNGTANVPMYAQHYLNYGAVETMTYKLVDNNWSEVPIDMNMVTWDDINTV
WVPDSYLQIDYTISADTLTLSTQNESHRLGTVTDLSGQTLDIQIGSGTTMQVTFSAGAIQ
YESLYKADNEIFYSYWNSGLGYTTLEDHMNGDGTFYWDESTWQPAFVAQRNAGGTAAVDS
NGADITTLTLGMTGNLVADGNNSQIVGTWWVSTLPNDTNLIVRTELNATLVDPAMYNEGE
AAFTHIHNGVVYNGSYSAPMTDFIVGNDSVTYNDTAMNDILTAIANYTPPATPMTVDEFW
ALTEIPISQAEWDALAKAQVSLLADMDLWGVWPDSNGTAVIAVDSEALYADSNGTVMFKD
INGTVTESHPFTINLAGTELNVSIPPNGHLFAYLGETYDQAALEAMFGITMPAGSEGYKT
AHLRLSDEYDFWGPLASFDVNYSSMTFTTLAEFVTANQGGTGGYVFNVNGTTGIQFTAGD
AYTGGSSSGTVVLIDFSDMQNPQVVESGSWHVQSDGNGDVIIVELPSMNWPFAATVMNDG
FGDYVAEGDMQPAFTGDIEIKFNIIARDALINYFMSGGGSSTTPTTANDATLVGAWALGG
ITTMDALLIVADNDKYMAVQQVLGSDGIIGGVEVGQYTLDAGGNFTNAAPLINTNAGDSA
VGATVVDNGDDTATLTTVSDGPAVFNRLSSAISLEAGAWIMNQSTTGSVKFVILALDGAG
HYMVADVDENQGSDPVEIEPGSFGRYNMTEFGTYVVEGNGTVTMMPDAVTDESAVCTDAD
TSGCDTVAGDTNLEFGLTAYDASGHLVPVNMTVSFDATNNYMTLDSSMVFVRVVPNGPVI
FQ
NT seq
5409 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatttagaaaaatcatgctctctgcggctgccgtgcttgccatcggcggctgt
ggcggcggtggaggcgggggcagcagcgaccctgccagcagcggcggagtcattgacggc
tatgtgtcgggcgcgaccgtctttgccgacagtaccggcgaaggggaacacaacgatacg
gagccatcgacggtgaccgatacgaacggggacttcgcttttgcggtgacgattgccgac
gggacgaagatctacgcttacggcggtaccgatatcagtaccggcttcccttttgaaggg
cggctctcaaccgtgtatgacgcgacacgtcccatcgtcctttcgccgctgacaacctat
gtcgcggcgatcatggcctcggacccgacgatgacattcgatacggcggccgatgcggtc
gccgccaatctggggatcagcgctgatgcggtgaaaaacgaccccatgctcgacagcgac
agctttatggccgcacagaaagtgcagaaggtcgttgaagtattgagcgcggcaacgaaa
actgacggcgagtcttttaacgatgcttacgaacaggtgttcaatgcgctggcaaccacg
acctccggtgaattcaatgcaaccgaactggcggccgaggtcggtgccgacccgtcgatc
gcgacctttgtcgaaacgctcgccgggacgatcgatgaccttgcagccaacgtcacgacg
gtaggtgaactggacggtttcggcgaaaccatcaatacctatgccgaagcggcggagggg
gcgatcgaaaacggcgatctcacggccgtcagtgatctgacgacgacactcggcgacatg
aacacgacccaggtcgcgcaggatatcgaaacggggacctacgtcgacccgatgatcgcc
gcgctggcggaagtcgaagatgccctcacaaacaatatcacttatctcgggacgaatacg
gccaatgagaatattacggccgatctggtgctgagcagtcctgccgcggcgccctatgat
acgccggatctgaacctgacatggtcggcgacgcctatgggcgtcatcgatgtcgctacc
ggtgccgtgacacgcagcgatacggcggatgtggccgtggtgctcaaagcgacggtcgcg
aacagcctggtcacgaacaaccgggcattcgaccttgtcgtcatgcggaacgaatatgcg
ccggtcgcggtggccgacaacctgaatctcgatgaagataccaatgcgacgctcaacgtc
ctggcgaacgatacggaccagaacggcgatacgctctttgtcactgccgtttcggccgcg
ggccacggcgcggcggtgatcaatccggacggaacggtcacctacaccccggccgcaaac
tacaacggtccggacagctttacctatacggtcggtgacggcacgggccgcagtgccgac
ggcaatgtctcggtcacggtcgctgcggtaaacgatgccccgacgatcggcggaacaccg
gcagcgtcggtcgaccaggatgcagcgtacagctttacgccttcttccggtgacattgac
ggcgacacactgaccttcagcatcgtcaacccgcccgcatgggcggcatttgacccggca
acgggggcgctgacgggtacgccgggcaacggcgacgtcggtacgaccgccgatatcaat
atctcggtgaccgacggtacggccacggtctccctgccgctcttctccgtcaccgtcgtc
aacgtgaacgacgcgccgacgatcgacggtacgccggccacatcggtgaaccaggacgcg
ccgtacagctttacgccgggtgcgagtgatctcgacggcgacacgctgactttcagcatt
caaaacaagccctcctgggcgacatttgacacagcgacaggagcactctccggcactccg
ggcaatgccgatgtcggcacgaccacggggatcgtcatctccgtctccgactcgctgctg
acggcatcgctggcagccttcgatctggaagtgatcaatgtcaacgacgccccgacggcg
tcggccgcatcgttccaggtgcagacgaacacccagcttgacggcgacctgaagccgtac
gcgtcggatatcgatgtcggcgacaccctgacctttacgcaggtcggaacacttgccgga
ctgacgctcaacagcaacggtaccttcacgttcaccagtgcgtcggaaggcaactttacc
tttgattacgaggtctccgacggcacactgacgagcgccccggcaacggtcaccatcagt
gtcgtcgccaacttctcacccatagcggccgactttacggccactaccgatgaggatacg
gcggtgctgatcgacgtggtggcacacaccggcgacagcgacggctcggtggatgccacg
acggtggccgcctccggcgcaacggacggtaacctgagcgtcaacccgacgacgggtgtt
gtgacctacatgccgaacgccaatttcaacggtacggacagttttacctacacgatccag
gataaccagggcgcgacttcgctcccggcgacggtcacgctcacggtcgcacctgtcaac
gacgccccgacgatcgaccccatcggcaacccgccggcagtggcggtcagtgcaccgatc
ttcgaagtcccggtctccattgccgatgttgacggtgatgcactgacgctgagcgccgtt
tcgtccaatccgggcgtcgccgcagtttcggcgaacggtacgacggtagcggtcgatcct
gtttcggaaggtactgcaactgtgacggtcaccgtcgatgacggcgttcttactgcccag
gagaccttcgtcgtcacagtcgttgccgatccggtactgatggacaacagcttttacgac
gggcagtacctgtatgactactggctggaaaacaacggtacggcaaacgtgccgatgtat
gcacagcactaccttaattacggtgctgtcgagaccatgacttataaactcgtggacaac
aactggagcgaggtcccgatcgatatgaacatggtgacctgggatgacatcaacacggtc
tgggtcccggactcttatctgcagatcgactacaccatcagcgcggacacgctgacgctc
tccacgcagaacgaatcgcaccgccttgggacggtcacggacctgagcgggcagacgttg
gatatccagatcggctccggaacgacgatgcaggtcacgttctctgcaggtgcaatacag
tatgaatccctctacaaggcggacaacgagatcttctactcctactggaacagcggtctt
gggtacacgacactcgaagaccatatgaacggcgacgggacattctattgggatgagtcg
acatggcaaccggcttttgtcgcgcagcggaatgccggcggcaccgctgccgtcgacagc
aacggcgcggatattacgacgctgacgctcggcatgacgggtaacctggtcgccgacggc
aataacagccagatcgtcggtacatggtgggtctccaccctgcccaatgatacgaacctg
attgtccgtaccgagttgaatgccacgctggtcgaccctgccatgtataatgagggcgaa
gccgcgtttacacatatccataacggtgtggtctacaacggttcgtacagtgcgccgatg
acggactttatcgtaggcaatgattcggtaacctacaacgatacggcgatgaatgatatt
ctgaccgctattgcaaactatacgccgccggcaacgccgatgacggtcgacgagttctgg
gcattgaccgagattcctatcagccaggcggagtgggatgcccttgccaaggcccaggtc
tccctcctcgccgacatggacctgtggggcgtctggcccgacagtaacggaacagcggtc
attgccgtcgattccgaagcactctatgccgactcgaacggtacggtcatgttcaaagac
atcaacggtacggtgacggagagccatcccttcacgatcaatcttgccggcacggaactc
aatgtctccattccgccgaacggccacctgttcgcgtacctgggggaaacctatgaccag
gcggccctggaagcgatgttcggcatcacgatgccggcaggctccgaagggtataaaaca
gcgcatctgcgtctgagcgacgagtatgatttctgggggccgttggcatcgtttgatgtg
aactactcctccatgaccttcacgacgctggcagagtttgtcacggccaaccagggcggt
acgggcggatacgtctttaacgtcaacggcaccaccggtatccagttcactgccggcgat
gcctatacgggcggaagcagcagcgggacggtcgtgctgatcgatttcagcgatatgcag
aacccgcaggtcgtggaaagcggtagctggcacgtccagagcgacggcaacggcgatgtc
atcatcgtcgaactgccgagcatgaattggcctttcgccgcgacggtgatgaacgacggc
ttcggtgactatgtcgccgagggcgacatgcagccggcctttaccggcgatatcgagatc
aagttcaacatcatcgcccgtgacgctctgatcaactactttatgagcgggggcggcagc
agcaccacgcctacgaccgccaacgatgcgacgctggtcggtgcctgggcactgggcggc
atcacgacgatggatgcgcttctcatcgtcgccgacaacgataagtacatggcggtgcag
caggtgctgggttccgacggtatcatcggcggtgtcgaagtgggacagtatacgctggat
gcgggcggcaatttcaccaatgccgcaccgctgatcaataccaatgccggcgacagtgcc
gtaggcgcgacggtcgtcgacaacggtgacgatacggcaacgctgaccaccgtcagtgac
ggtccggcagtcttcaaccgcctcagcagtgcgatcagtcttgaagcgggcgcgtggatc
atgaaccagtcgacgacgggcagcgtcaagttcgtcatcttggccctcgacggcgcgggc
cactatatggtcgccgacgtcgatgagaaccagggttccgatcctgtcgaaatcgaaccg
gggagcttcgggcgctataacatgacggagttcggtacctatgtggtcgaaggaaacggt
acggtgacgatgatgccggatgccgtgacggatgagagcgcggtctgtaccgatgcggat
acctccgggtgcgacaccgtcgccggtgatacgaacctggagttcggtctgacggcctac
gacgcctccggccatctggtgccggtcaatatgacggtcagtttcgatgccacgaacaat
tacatgacgcttgacagcagcatggtgtttgtccgggtcgtacccaacggaccggtgatc
ttccagtaa
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