Thiomicrolovo subterrani: WCX49_11050
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Entry
WCX49_11050 CDS
T11234
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub00300
Lysine biosynthesis
tsub00470
D-Amino acid metabolism
tsub01100
Metabolic pathways
tsub01110
Biosynthesis of secondary metabolites
tsub01120
Microbial metabolism in diverse environments
tsub01230
Biosynthesis of amino acids
Module
tsub_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
WCX49_11050 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
WCX49_11050 (lysA)
Enzymes [BR:
tsub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
WCX49_11050 (lysA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
XAU02441
LinkDB
All DBs
Position
complement(2133535..2134749)
Genome browser
AA seq
404 aa
AA seq
DB search
MSMDFNALADTYGTPLYVYDFDAMRAQYEELKEAFRGRKSLISYAVKANSNLSVVKQFAD
LGAGADCVSIGEVRRAMMAGVPKYKVIFSGVGKRDDEIREAIERDILYINLESEAELGRV
EMIAQELGQVARISIRVNPNIDPKTHPYISTGLHDNKFGVEIDAAKRMYIRANASQWIEP
VGIHFHIGSQLTELDPIREASEIVADLVRSLKAAIGIELKFFDVGGGLGIRYKDETTITP
YDYAQAVLSTLTGMDITVVCEPGRFMTANAGYFLTRVLYEKQNGAKRFVVVDGAMNDLIR
PSLYRAYHRITPASAHEGDETPADIVGPVCESGDFLAKDYPLPPMAHNDLLVVHSAGAYG
FGMGSNYNTRGRAAEVAVEAGADRLIRDRESFEDLVAPELKYLG
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatggacttcaatgccctggcagacacatacggtacaccgctctacgtgtacgat
ttcgatgcgatgcgtgcacagtacgaggagctcaaagaggcgttccgcggacgcaaatcc
ctcatctcctacgccgtcaaggccaactcgaacctcagcgtcgtcaaacagttcgccgac
ctcggtgcgggcgcggactgcgtctccatcggtgaggtgcgccgtgcgatgatggcgggc
gtgcccaaatacaaggtgattttcagcggcgtcggcaaacgtgacgacgagatccgcgag
gcgatcgaacgggacatcctctacatcaacctcgagagcgaggcggaactggggcgcgtc
gagatgatcgcacaggagctggggcaggtcgcgcggatcagtatccgtgtcaaccccaac
atcgaccccaagacccacccctacatctccaccgggctgcacgacaacaagttcggtgtt
gagatcgatgcggccaagcggatgtatatccgcgccaacgcgtcacaatggatcgagccc
gtcgggatccacttccatatcggcagccagctcaccgagctcgatccgatccgcgaagcg
agcgagatcgtcgccgacctcgtgcgctccctcaaggcggctatcggcatcgagctgaag
ttcttcgacgtcggcgggggactcggtatccgatacaaggatgaaacaacgatcacgccg
tacgactacgcccaggcggtcctctccacgctgacggggatggacatcaccgtcgtctgc
gaaccgggccgtttcatgacggccaacgccggctacttcctgacacgggtactctatgag
aaacaaaacggcgcgaagcgttttgtcgtggtcgacggggcgatgaacgacctgatccgc
ccgagcctctaccgtgcctaccaccgcattaccccggcctcggcccatgaaggcgacgag
acgccggcggatatcgtcggtcccgtctgcgagagcggggacttcctggccaaggattac
ccgctgccgccgatggcgcataacgacctactcgtcgtccacagcgccggggcctacggc
ttcggcatgggcagcaactacaatacccgcggacgtgccgcggaagtcgcggtcgaagcg
ggagcggaccgcctgatccgggaccgggagtctttcgaggacctggtcgcaccggagctc
aagtacctcggctga
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