Thiomicrolovo subterrani: WCX49_12245
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Entry
WCX49_12245 CDS
T11234
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
tsub Thiomicrolovo subterrani
Pathway
tsub03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tsub00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
WCX49_12245 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tsub03011
]
WCX49_12245 (rpsD)
Ribosome [BR:
tsub03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
WCX49_12245 (rpsD)
Bacteria
WCX49_12245 (rpsD)
Archaea
WCX49_12245 (rpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
SYY_C-terminal
MrpR_N_CB
S4_2
HTH_18
Motif
Other DBs
NCBI-ProteinID:
XAU02664
LinkDB
All DBs
Position
complement(2375316..2375942)
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AA seq
208 aa
AA seq
DB search
MARYRGPVEKIERRFGVSLNLKGERRLAGKSALDKRPYAPGQHGQRRKKVSEYGTQLNEK
QKAKFMYGISEKQMRAIFAEAKRREGNTGTNLVLLLEQRLDNVVYRMGFASTRRFARQFV
THGHVLVDGKRVDIPSYRVKPGQKIEIREKSKNNVQVVRAIELTNQTGMAPWVDVDGEKK
FGIFTRLPEREEVVIPVEERFIVELYSK
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatacagaggtccagtagaaaagatcgaaagaagattcggcgtcagccttaac
ctgaagggtgagcgtcgtctggcaggcaaatctgcactcgacaaacgtccttatgctccg
ggtcagcacggccagcgccgtaagaaagtgtctgaatacggcacacagctgaacgagaag
caaaaagcgaagttcatgtacggcatctccgaaaagcagatgcgtgcgatctttgctgaa
gcaaaacgccgcgaaggcaacaccggtacgaaccttgttctcctgctcgagcagcgcctg
gacaacgtcgtataccgtatgggattcgcgtctacacgccgtttcgcacgccagttcgtt
acccatggtcatgtcctggttgacggcaagcgtgtcgacatcccttcttaccgcgtcaaa
ccgggtcagaagatcgaaatccgcgagaagagcaagaacaacgttcaggttgtccgcgcg
atcgaactgactaaccagacgggcatggctccgtgggttgacgttgacggcgagaagaag
ttcgggatctttacccgccttccggagcgtgaagaagttgttattccagtggaagaacgt
ttcatcgtcgagctttactcgaaataa
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