Thiomicrolovo sulfuroxydans: LOH54_01705
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Entry
LOH54_01705 CDS
T11233
Name
(GenBank) MBL fold metallo-hydrolase
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
tsul Thiomicrolovo sulfuroxydans
Brite
KEGG Orthology (KO) [BR:
tsul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tsul03016
]
LOH54_01705
Enzymes [BR:
tsul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LOH54_01705
Transfer RNA biogenesis [BR:
tsul03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LOH54_01705
Prokaryotic type
LOH54_01705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Motif
Other DBs
NCBI-ProteinID:
UFS62857
LinkDB
All DBs
Position
336159..337109
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AA seq
316 aa
AA seq
DB search
MKLTFLGTSAGKPTKERNVTALALQMEQEPQWYLFDCGEGTQHQLLRTRPSVGKLAAIFI
THMHGDHIFGLPGLLASKRMDRAFRPLRIYGPKGIAAFINCFTDTDADYLGYDLQIIEYT
PGDQFIFERFRVTVMPLVHSIESHGFLVKENDTANRLDEAKLRSEGLEPSPLYGELKRGL
TVTAGGRVYEPQAYMLEPFRGRSLLIAGDNAEPSVLGAALEGLDLLVHECTYTQAIYDSL
VEKQLHTTARDLGRAAGAAGVGALIATHISPRFGRGGPHELSEIEQEIRSAYDGPLFIAE
DFDVFRLGRDRRIERE
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccttccttggaacaagcgcgggaaaaccgacgaaggagcgcaacgtcacg
gcgctggcgctgcagatggagcaggagccgcaatggtacctcttcgactgcggggagggg
acccagcaccaactgctgcgcacgcgcccctccgtcggaaaactggccgcgatcttcatc
acccatatgcacggcgaccacatcttcgggctgccgggcctgctggcatcaaagcggatg
gacagggccttccgtccgctgcgcatttacgggcccaaagggatcgccgcattcatcaac
tgctttacggacaccgacgccgactaccttgggtacgacctgcagatcatcgagtacacg
ccgggggatcagtttatctttgagcgtttccgcgtcactgttatgccgttggtgcactcc
atcgagagtcacggcttcttggtcaaagagaacgacaccgccaaccggctcgacgaggcg
aagctgcgcagtgaaggcctggaaccctccccgctctacggggagctgaaaaggggcctg
accgtcaccgccggggggcgggtctacgaaccgcaggcgtatatgctggagccgttccgg
ggacgctcactccttatcgccggggacaatgcggagccttccgtactgggcgcggcgctg
gaggggctcgacctgctcgtgcacgaatgcacctacacgcaggcgatctacgacagtctc
gtcgaaaaacagctgcacacgacggcccgcgatcttgggcgcgcggcgggcgctgccggc
gtcggcgcgctcatcgcgacgcacatcagcccccgcttcggcaggggcggtccccatgaa
ctaagcgaaatagagcaggagatccgctcagcctatgacggccccttgttcattgccgag
gatttcgacgtgttccgtcttgggcgggacaggaggatagagcgggagtga
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